Odocoileus virginianus (white-tailed deer): 139036306
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Entry
139036306 CDS
T10722
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
139036306 (SOX1)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139036306 (SOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139036306
NCBI-ProteinID:
XP_070327497
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All DBs
Position
8:complement(24865021..24868945)
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AA seq
368 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGAKANQDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLLKKDKYSLAGGLLAAGAGGGAAVAGGVGAAAVGQRLESPGGAAGGGYAHVNGWANGA
YPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHNPQPMHRYDM
GALQYSPISNSQGYMSASPSGYGGLPYGAAGGAHQNSAVAAAAAAAAASSGALGALGSLV
KSEPSGSPPAAAHSRAPCPGDLREMISMYLPAGEGGDPAAAQSRLHSLPQHYQGAGAGVN
GTVPLTHI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcattcgcccggcggcgcccaggcgcccacg
aacctgtcgggcccggccggggcgggcgggggcggcggcggcggcgggggcgccaaggcc
aaccaggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcggtcagcgg
cgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggc
gccgagtggaaggtcatgtccgaggccgagaagcggccgttcatcgacgaggccaaacgg
ctgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccgcggcgcaagacc
aagacgctgctcaaaaaggacaagtactcgctggccggcgggctgctggcggccggcgcg
ggcggcggcgcggccgtggccgggggcgtgggggcagcggccgtgggccagcggctcgag
agccccggcggcgcggcgggcggcggctacgcgcacgtcaacggctgggccaacggcgcc
taccccggctcggtggcggcggcggcggccgccgcggccatgatgcaggaggcgcagctg
gcctacgggcagcacccgggcgcgggcggcgcgcacccgcacgcgcaccccgcgcacccg
cacccgcaccacccgcacgcgcacccgcacaacccgcagcccatgcaccgctacgacatg
ggcgcgctgcagtacagcccgatctccaactcgcagggctacatgagcgcctcgccctcg
ggctacgggggcctcccctacggcgccgcgggcggcgcgcaccagaactcggccgtggcg
gcggcagcggcggcggcggccgcttcgtcgggcgccctgggcgcgctgggctcgctcgtc
aagtcggagccgagcggcagcccgccggctgcggcgcactcgcgggcgccgtgccccggg
gacctgcgcgagatgatcagcatgtacttgccggccggcgagggcggcgacccggcggcg
gcacagagccggctgcattcgctgccgcagcactaccagggcgcgggcgcgggcgtcaac
ggcacggtgcccctgacgcacatctag
DBGET
integrated database retrieval system
