Odocoileus virginianus (white-tailed deer): 139039047
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Entry
139039047 CDS
T10722
Name
(RefSeq) collagen alpha-2(I) chain
Organism
ovr Odocoileus virginianus (white-tailed deer)
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Gene cluster
GFIT
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NCBI-GeneID:
139039047
NCBI-ProteinID:
XP_070334973
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Position
17:23979636..23983116
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AA seq
1118 aa
AA seq
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MSGAAGQGALPGPGVRELVAERLGLCVGPSRYGRGVRRPWGKRWGAEMFRGRGTRRRARS
FVRETRCVSADRLPNRRRPWGRRQAAGRAQASENEAAGTPGPAGSVEAARDRGTVWVNGA
VGEPQVVGPVGSVWVTGPGEEETVYRSPRGCERKGRPGSVGHGSILELWLKVQAMRAASG
GGQRSRVELHPVPAGEGPVERGVPGRASWVETSREGLTGPWVKGQAGAAPRGRGLSIPPG
PGAGCERAMGCCGQGQAVRMPPVAEPETLEASSGIAPHLPGRGQAVGVPGPLEGIGYGVA
PSSSAKGLTLRVPGAAGWPEAVEVPRAVAGELCCGGAPDPWGRQRAAQVPGALAQEVICG
HTPGLWGRGQTTAVHRAAQGDTPSVGAPVVQRRRRAVGETGPRALPGLWGTRQPVEVPCA
IEEGVRYGGDPCFRERGQAGWAETGSGGNSGSWEAAQTAGWAVCGPEEQEAGPGSVPGHW
GIGQATGVPWAPRTETGCGCVLSLWGTQQPLGVSQAVGLSGTGGVQTSCCCVPGLWARQE
ALGVPLAETVPAVVRETYGGNVLNLLERRQALGEQEAVVPAAVGSPGSVCQETGCGDASC
LCLRSQAVGLSEHVRVPETAGISSYRCALSPGGEAARVPAAVWVSDSVGQEGSSREDWNL
WAGVHAAGRPPASGIPTAPQELGLAGEDAGSWGRRQSARVPMPAEVPWAPRVCAPLGVET
GSGGFLHLPGGRQTAGVSLTAGVSADVGVPVALRAPWPVQEVACSVGVSGLCRERETVWG
PMDAMDPIRMGMPTTARVPGPMSEEMGPGGISGLAGGRQSGGACVTMGLHTAMGMPGPVG
EEMLSGHFSGLSGSRQTAEVPVAAASISLTVGVPSAVGVPSAVGAPGPLVGDVTSGDGSG
VWGRRPVTEVPVAARASGLVDGETGSEGVADPWRRPDRAVPEAARVPLSLGVLAAVGVPM
AGPGPAAVWVTGPAGEEPRAAVSDLAGVRRQFAEGPGAPPIGEIGGRNVLGLVGRSQPVG
VSYTCGHGTRLWRCLRSAGGELDYENMPGVSRTGGTVGENEAEEVPQESQEETDIGLVRD
HARQGGRRQAGGESAVRAGGNNLGDSFEGEDRLRGAFH
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggcggctggccaaggggccttgcccgggccgggtgtgcgcgagctcgtggcg
gagagactgggcctatgcgtgggacccagccggtacggacgcggagtccggcggccgtgg
ggaaagagatggggtgcagagatgttccgaggccgtggaactaggcgccgggcgaggtcc
ttcgtgcgggagacgcgctgcgtgagtgcggacaggctgccgaatcgtcggcggccttgg
gggagaagacaagcagcgggaagagcccaggcctcggagaacgaggctgcgggaacacct
ggccctgcaggctcggtggaggctgcacgagaccgtgggaccgtgtgggtaaacggggct
gtaggggaaccgcaggtggtggggcctgtcggctctgtgtgggtgactggccccggggag
gaggagacggtttacaggagcccccggggctgtgagaggaaaggtcgtccgggatccgtg
gggcatgggagcattctggaactgtggttgaaagtgcaggctatgagggcagcttcaggt
ggtggacaacgaagcagagtcgagctccatcctgtgcccgcaggagaggggccggttgaa
aggggggttcctggtcgggcttcgtgggtagagaccagccgtgaaggtctcaccggaccg
tgggtgaaaggacaggcgggggcagccccccggggccggggactatccatccctccgggc
ccaggggcgggctgtgaaagggccatgggctgctgtgggcagggccaggctgtgaggatg
ccacctgtggctgagcctgagactctagaggcaagttccgggattgccccacacctgccc
gggaggggacaagctgtgggggtgcctgggcccttggaggggattggctatggggttgcc
cccagctcttcagcaaaaggactgacactgcgggtgcccggggccgcggggtggcctgag
gctgtggaggtacccagagctgtggcgggagagctctgctgtgggggggctccggatcct
tgggggagacagcgggcagcacaggtacctggggctctggcacaggaggtgatctgtggg
cacaccccaggcttgtgggggagagggcagaccacagctgtgcacagagcggcccaaggg
gacactccctctgtgggtgccccagttgtgcagcggaggagacgcgctgtgggggagaca
ggccccagggctcttcctggcctatggggcaccagacagcctgtggaggtgccttgtgcg
attgaagagggagtgcgatatgggggtgacccgtgcttcagggagaggggacaggccggg
tgggcagagacaggctctgggggaaactcaggatcctgggaagctgcccagactgcaggc
tgggcagtgtgtggtcccgaggagcaggaagcaggccctggcagtgttccaggccactgg
ggtataggacaggctacaggggtaccttgggctcccaggacggaaacaggctgtgggtgt
gtcctgagtttgtggggaacacagcagccattgggggtgtcccaggcggtgggattatca
gggaccggaggagtgcagaccagctgctgctgtgtcccgggcctgtgggctagacaggag
gctctgggggtgcctctggctgagacagtgccagccgtggtcagagagacctatggtggg
aatgtcttgaatctcctggaaaggaggcaggctctgggggagcaggaggctgtagtgccc
gctgctgtagggagtcctgggtctgtgtgtcaggagactggctgtggggacgcttcctgt
ctctgcctgaggagccaggctgtagggctgtctgagcacgtgagggtgccagagacagct
gggatatccagctatagatgtgcgctaagtcccgggggtgaagctgcccgggtgcccgcc
gctgtatgggtgtctgactctgtgggtcaggaaggcagctccagggaggactggaacctg
tgggcaggggttcatgctgccgggagacccccggcttcagggatacccacggctccccag
gagctggggttggcgggggaggatgctggctcgtggggaaggagacagagtgccagggtg
cccatgcctgctgaggtgccctgggcccctcgggtgtgtgctcctctgggggtggagact
ggctctggagggttcttgcacttgccaggggggagacagacagcaggagtttctctgact
gcaggggtgtctgcagatgttggggtgcccgtggctctcagggcgccttggcctgtgcag
gaggtggcttgttctgtaggtgtctcaggcttatgcagggagagagagacagtgtgggga
cctatggatgccatggatcccatcagaatggggatgcccaccactgccagagtgcctggg
cccatgagtgaagagatggggcctggaggcatctcaggcttggcgggagggagacagtct
gggggagcatgtgtgaccatggggctgcacacagccatggggatgccagggcctgtgggg
gaggagatgctctctgggcatttttcgggcttatctggaagcagacagactgctgaggtg
ccggtggcggctgccagcatttccctgacggtgggggtgccctcagctgtcggggtgccc
tcagctgtcggggcccctgggccgctggtgggcgatgttacttctggggatggctcaggt
gtatggggaaggagacccgtgactgaggtgcctgtggctgccagggcttcaggacttgtg
gacggggagactggctctgaaggcgttgcagacccatggaggagacctgacagagccgtc
cctgaggctgcgagggtgcctttgtctttgggggtgcttgcagccgtaggggttcccatg
gcagggcctggccctgcggcggtgtgggtgactgggcctgcgggagaagaacccagggca
gctgtctctgacctcgcgggggtgaggagacagttcgcagagggccctggggctcccccc
ataggggagatcggaggtagaaacgtcctggggctggtggggaggagccagccagtgggg
gtgtcttacacctgtgggcacgggaccagattatggaggtgcctgaggtcagcgggggga
gaactggactatgagaacatgccaggagtgtccagaacaggtgggactgtgggggagaat
gaagctgaggaggtgccccaagagtcgcaggaggagacagacatcggcctcgtcagagat
cacgcacggcagggtgggaggagacaggctggaggagagtctgccgtcagggcgggggga
aacaatttgggagacagttttgagggggaggacagattgaggggggcattccactag
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