Odocoileus virginianus (white-tailed deer): 139039487
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Entry
139039487 CDS
T10722
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139039487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
139039487
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
139039487
U7-dependent histone pre-mRNA processing factors
139039487
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
Motif
Other DBs
NCBI-GeneID:
139039487
NCBI-ProteinID:
XP_070336451
UniProt:
A0ABM4J8S9
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Position
18:13762535..13764668
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AA seq
607 aa
AA seq
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MMSSLAVRDPAMDRSLRSVFVGNILYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGY
GFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPI
DPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVM
RIMDPEIALKILHCKIHVTPLIPGKSQSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQH
LARRPVKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGTMQPQVGMPGVGPVPLERG
QVQISDPRAPIPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPP
MHHAAGHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAM
ETEVLETRVMERRGMETCAMETRGMEVRGMDARGMEMRGPGPSSRGPITGGIQGPGPINM
GAGGPQGPRQVPSISGVGNPAPGMQGAAMQGGGMQGAGIQGAGMQGAGMQGAGMQGEGMQ
GAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTANQIAMLPPEQRQSILILKEQI
QKSTGTS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttccgtgttc
gtggggaacattctgtatgaggcaactgaagagcagttaaaggacattttctctgaggtt
ggttctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttat
ggcttctgcgagtaccaagaccaggagaccgcgcttagtgccatgcggaaccttaatggg
cgggagttcagcgggagagcgcttcgcgtggacaatgcagccagtgaaaagaacaaggag
gagctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccccatc
gatccagaagatgctcctgagtcgattaccagagcagtcgctagtcttcccccggagcag
atgtttgagctgatgaagcagatgaagctctgtgtccaaaacagccaccaggaagctcga
aatatgttacttcaaaacccacagctggcttatgcactgttgcaggcacaagtggtgatg
agaatcatggatccagagattgctctgaaaattctgcattgcaaaattcatgtcacacca
ctcatcccagggaaatctcaatccgtttctggccctggccctggccccggccctgggctc
tgtcctggacctaacgttctgctgaaccagcagaaccccccggcccctcagcctcaacat
ttggccagaagacctgtgaaagacatccctcctctgatgcagacccctattcagggtgga
attccaccccaaggcccgatgccagccgcagttcctggccctggccccttaactcctggt
ggaacaatgcaaccccaagttggaatgccaggagttggccccgtgcccttagagcggggg
caggtgcagatatctgatcccagagctcctattcctcgtggacccatgactgctggtggc
ctgcctcctcgaggactgttgggggatgctccaaatgatccacgtggagggactttgctt
tcagtcactggagaggtggagcccagaggctatcttggcccaccacatcagggtcctcca
atgcaccatgccgctggtcatgacagccggggcccttcctcacatgagatgaggggaggg
ccgttggcagatcctagaatgctcatgagtgagcccagaggacctatgatagatcaaagg
gggctacctatggatggcagaggcagcagagactctcgagggatggagactcgagccatg
gaaacagaggtcttagagacacgagtgatggagagaagaggaatggagacctgtgcaatg
gaaaccagaggaatggaagtgagaggcatggatgcaagaggaatggagatgaggggccct
ggccccagttcgagaggccctattactgggggaattcagggtccaggtcctattaatatg
ggggcaggtggtcctcagggacccagacaggttcccagcatttcaggggtgggaaaccct
gcacctggcatgcagggggcagctatgcaaggaggtggcatgcagggggcgggcatacaa
ggtgctggcatgcagggggcaggcatgcaaggagctggcatgcagggggaaggcatgcaa
ggggcaggcaagcaaggtggaggccagcctagcagttttagtcctgggcagagccaagta
accccccaggatcaagaaaaggcagctttgatcatgcaggttcttcagctgactgcaaat
cagattgccatgctgcctcctgagcaaaggcagagtatcttgattttaaaggaacaaatc
cagaaatctactggaacttcttga
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