Orbus wheelerorum: RHO14_05970
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Entry
RHO14_05970 CDS
T10511
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
owh Orbus wheelerorum
Pathway
owh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO14_05970 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
owh03021
]
RHO14_05970 (rho)
03019 Messenger RNA biogenesis [BR:
owh03019
]
RHO14_05970 (rho)
Transcription machinery [BR:
owh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RHO14_05970 (rho)
Messenger RNA biogenesis [BR:
owh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHO14_05970 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
AAA_25
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WVD72346
LinkDB
All DBs
Position
1297044..1298306
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKTKPVSELVALGEKTMGLENLARLRKQDIIFAILKQHAKSGEDIFGDGVLEILQ
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEV
NHDKPEDARNKILFENLTPLHANSRLRMERGNGSTEDLTTRVLDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSLAMKYPECVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPAARH
VQVAEMVIERAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKILTGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELQLSRKIAERRVFPAID
FNRSGTRKEELMTSPDELQKMWILRKILNPMGEIDAMEFLIDKLSMTKTNEEFFDMMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaactgaactaaaaacgaaacctgtctctgagcttgtcgcgcttggcgaaaaa
acaatggggcttgaaaatttagcccgtctacgtaaacaagatattatttttgctatttta
aaacagcatgctaaaagtggtgaagacatttttggtgatggcgttcttgaaattttgcaa
gacggctttggctttttgcgctcagcagatagttcttatttagcgggtcctgatgatatt
tatgtctcgccaagccaaattagacgatttaatttaagaacgggtgatacgatatctggc
aagataagaccacctaaagaaggtgaacgttattttgctttattaaaagttaatgaagtt
aaccacgataaacctgaagatgcccgcaacaaaattctatttgaaaacttaacgccttta
catgctaattcaagacttcgtatggaacgtggtaacggttctactgaagatttaaccacg
cgagtattagatctagcttcaccaattggtaaaggtcaacgtggtttgattgttgcgcca
cctaaagcgggtaaaacgatgttgctacaaaatatcgcacaaagcctagctatgaaatat
ccggaatgtgtattaatggtactacttattgacgagcgtcctgaagaagttaccgaaatg
cagcgtttagtaaaaggtgaggttatcgcttcaacatttgatgaacccgctgctcgtcac
gtacaagttgctgaaatggtgattgagcgtgctaagcgtcttgttgaacataaaaaagat
gtgatcatattacttgattcaatcacacgtttagctcgtgcatacaataccgttgtgcca
gcgtcaggtaaaatcttaaccggtggcgttgatgctaacgcgttacatcgaccaaaacgc
ttctttggtgccgcgcgtaatgttgaagaaggcggtagcttaaccattattgcaacggca
ttagttgatactggctcaaaaatggatgaagttatttacgaagagtttaaaggtactggt
aatatggaactacagctttcacgtaaaattgctgagcgccgtgtattcccagctattgac
tttaatcgttcaggtacacgtaaagaagagttaatgacctcgcctgatgaactacaaaaa
atgtggattttacgtaaaattcttaacccaatgggcgaaattgatgcgatggaattctta
attgacaaattatcaatgacaaaaacgaatgaagagttttttgacatgatgaaacgttca
taa
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