Orbus wheelerorum: RHO14_06330
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Entry
RHO14_06330 CDS
T10511
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
owh Orbus wheelerorum
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
owh03032
]
RHO14_06330 (topA)
03400 DNA repair and recombination proteins [BR:
owh03400
]
RHO14_06330 (topA)
Enzymes [BR:
owh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RHO14_06330 (topA)
DNA replication proteins [BR:
owh03032
]
Prokaryotic type
DNA Topoisomerases
RHO14_06330 (topA)
DNA repair and recombination proteins [BR:
owh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHO14_06330 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WVD72418
LinkDB
All DBs
Position
1379474..1382086
Genome browser
AA seq
870 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKEYVVKSSIGHIRDLPVSGNKSTSTSEETKKATGKKVK
RSPQQVLVDRMGVDPYHDWQANYEILPGKSKVVAELKKLAKDADTIYLATDLDREGEAIA
WHLKEVIGGEDEKYRRVVFNEITKAAIQNAFKKPSLLDIDRVNAQQARRFMDRVVGFMLS
PLLWKKVARGLSAGRVQSVAVALVVEREREIHAFIPQEYWDLYADLKTKAKDKLAMQVTH
FKNKAFEPKDRVAIDMALDELNHCQYQVKNIEEKPTKSNPTAPFITSTLQQAASTRLGFG
VKKTMTLAQRLYEAGYITYMRTDSTNLSQDALNMVRGYVEKEFGKKYLPEKPNFYASKQN
SQEAHEAIRPSDVSLLGEHLTDLESDARKLYQLIWRQFVACQMTVAEYSSTTISVQAGNF
TLKAKGRTLRFDGWTKVQPQLMKNNDDKILPAVKIDEMLELLTLTPTQHFTKPAARYNEA
SLVRELEKRGIGRPSTYATIISTIQDRGYVRLDSRRFYAEKIGEIVTDRLSENFNDLMSY
DFTARMEDTLDDVANKKNDWKHVLNTFFADFSSHLDVAEKEPNEGGMQLNPLVLTPEVKC
PNCQREMGIKTASTGVFLACSGYSLPPKERCKQTINLIPEHEALNILEDDSENSTAETEA
LRARKRCPKCHTAMDSYLLDNSHKLLICGNNPICDGFIVEEGTFKIKTYEGPVVECDKCG
SEMHLKSGRFGLYMGCTNAECKNTRKILKNGDVAPPKEDPVDLPELKCTKSDAHFVLRDG
ASGIFLAAHNFPKSRETRTPSVAELKRFEDRLSDKFIYLAQAPEKDPDGNDAIVRFSRKN
KQQYVTSEVNGKSTGWVMNYIDGKWVNSKK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatccctagttattgtggaatcaccagcaaaagcaaagacgattaacaaatat
cttggtaaagaatatgttgttaaatcgagtattggtcatatccgcgatcttcctgttagc
ggtaataagtctacaagtacatctgaagagacaaaaaaagcaactggcaaaaaagtaaaa
cgttcaccgcagcaggtgcttgtagatcgtatgggcgtcgatccttatcatgactggcag
gcaaattatgagattttacctggtaaaagcaaggttgttgctgaactaaaaaaactcgcc
aaagatgcagacactatatatctcgcgaccgacttggatagagaaggggaagccattgct
tggcatttaaaagaagtcattggtggtgaggacgaaaaatatcgccgtgtagtatttaat
gaaattactaaagctgcaatccaaaatgcatttaaaaagccaagtttacttgacatagat
cgtgttaatgcccaacaagcgcgccgttttatggatagagtcgttggttttatgttatca
ccactattatggaaaaaagtggctagaggattatcggccggccgagttcaatccgttgcc
gttgcgctagttgttgagcgtgaacgtgaaattcatgcctttattccgcaagagtattgg
gatctttatgctgatcttaaaactaaagcgaaagataaacttgccatgcaagtgacccat
tttaaaaataaagcatttgaacccaaagatagggttgcaattgatatggcattagatgag
ttaaatcattgccaatatcaagttaaaaatattgaagaaaagccaactaaaagtaatcct
accgcgccatttattacttcaacactacagcaagcagcaagtacaaggcttggttttggg
gttaaaaagaccatgactttagctcagcgcctatatgaagctggttatattacttatatg
cgtacagactcaactaatttaagccaagatgcgttaaatatggttagaggctatgttgaa
aaagaatttggtaaaaaatatttgcctgagaaacctaatttttatgcgagtaaacaaaat
tcacaagaagcgcatgaagcaattcgcccttcagacgtgtcattactaggtgaacactta
actgatctagaatcagatgcgcgtaagttatatcaacttatttggcgccagtttgtagca
tgtcaaatgacggtggctgagtacagttctacaacaattagtgttcaagcgggtaatttt
accttaaaagcaaaaggtagaacgttacgctttgatggttggacaaaagtacaacctcaa
ttaatgaaaaataatgacgataaaattttaccggcagttaaaattgatgaaatgttggaa
ctactaaccttaacaccaacgcagcactttactaaaccagccgctcgttataatgaggcc
tctttagttcgtgagcttgaaaaacgcggaataggtcgtccatcaacttatgcaacgatt
atttcaacaatacaagatcgtggttacgtaaggcttgatagtcgacgtttttatgctgaa
aaaattggtgaaatagtaacagatagattaagtgaaaatttcaatgatttaatgagttat
gactttaccgcccgcatggaagatacgcttgatgatgtggcgaataaaaagaatgattgg
aaacacgtactcaataccttttttgcagatttctcatctcaccttgatgttgctgaaaaa
gaaccaaatgaagggggcatgcagttaaatcctttagtcttaacaccagaggtaaaatgc
ccaaattgccagcgtgaaatggggataaaaaccgcgagtacgggcgtatttttagcatgt
tctggttatagtttaccgccgaaagaacgctgcaaacaaaccattaatttaattccagag
cacgaagcactcaatattttagaagatgatagcgaaaatagcaccgctgagacagaagcc
ttacgggctcgtaagcgctgccctaaatgtcatactgcgatggatagttacctgcttgac
aatagccataaacttcttatttgtggtaacaatcctatttgtgatggatttatcgttgaa
gaaggcactttcaaaattaaaacttatgaaggtccggttgttgagtgcgataaatgtggc
agtgaaatgcatcttaaatcagggcgttttggcctctatatgggatgcactaatgctgag
tgtaaaaatacccgtaaaattcttaaaaatggtgatgttgcgccaccaaaagaagatccg
gttgatttacctgaactaaaatgtactaaatcagatgcgcattttgtacttcgtgatggc
gcttcaggtattttcctcgcagcgcataatttccctaaatctagagagacaagaaccccg
tcagttgccgagcttaaacgctttgaagatcgtttatctgataaatttatttatttagcg
caggcgccagaaaaagatcctgatggcaatgatgctatagttcgttttagtcgtaaaaat
aagcaacaatacgtcacatcagaagttaatggtaagtctactggttgggtcatgaactac
attgatggtaaatgggtcaatagtaaaaaatga
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