Orbus wheelerorum: RHO14_06515
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Entry
RHO14_06515 CDS
T10511
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
owh Orbus wheelerorum
Pathway
owh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO14_06515 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
owh03019
]
RHO14_06515 (recQ)
03400 DNA repair and recombination proteins [BR:
owh03400
]
RHO14_06515 (recQ)
Enzymes [BR:
owh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHO14_06515 (recQ)
Messenger RNA biogenesis [BR:
owh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHO14_06515 (recQ)
DNA repair and recombination proteins [BR:
owh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RHO14_06515 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
6PF2K
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
WVD72454
LinkDB
All DBs
Position
1423134..1424960
Genome browser
AA seq
608 aa
AA seq
DB search
MSIAEQANEILHSVFGYKSFRNQQLPIIESVIRGEDNVVIIPTGGGKSLCYQIPALILPG
TTVVISPLIALMKDQVDQLLAYGIKAAYLNGSQSPQEQQFVANLYIQGEIKLLYIAPERL
ATSTFINMLKSVAPSLIAIDEAHCISQWGHDFRPEYLQIGQLKAKFSAVPIIALTATADD
VTRKDIIERLNLDKPQVRLTSFDRPNIRYTVVERLNPLEQVSSFLTNQKGNSGIIYCSSR
AKVDDMASRLANRGYSVAAYHAGLTTQERANAQERFLKDDVAIMVATVAFGMGINKPNVR
FVIHANAPRTIEAYYQETGRAGRDGLPAEAILLNNERDFNWYQTVIAEKEEGFHKSVELH
KLSEMIAFTQAQTCRRIVLLNYFGEHRVEKCNNCDVCLYPLEHYNGLVDAQKILSCVYRV
GQNYGTQYIVDVLRGSNRSLIKENGHNTLSVYGIGKEHSADYWTSIIRQLIHLGYLKQDP
TSFSALFLSEEARNVLRGDISLSLVKPRLELVKRTRQNRYARSINQTTILSYEERSLFNN
LKRLRKEIADMDDVAPYIIFSDESLLEMVKTQPESKRELLGITGVGKIKLEKYGELFLDE
IEKFITAN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagcagaacaagccaacgaaattcttcactctgtttttggatacaagtcattc
cgaaatcaacagttaccaataattgaatcagtgattcgtggtgaagataatgtggtcatt
attccaaccggcggcggaaaatccctttgttatcaaattccggcattaatattaccgggt
acgacagttgttatttcccctctgattgcgttaatgaaagatcaagtcgatcaattgctg
gcttatggcataaaagcagcatatttaaacggttcacagtcaccacaagagcagcaattt
gttgctaatttatatatccaaggcgagataaaactgctctatattgcccctgaacgattg
gcaacttcgacatttatcaatatgctcaaatccgttgcgccatcattgatagctattgat
gaagctcactgtatttcgcagtggggtcatgattttaggccagaatacttacaaattggc
cagcttaaagcgaaattttcggcggtgccaattattgcgttaaccgctaccgctgacgac
gttacgcgtaaagatattattgagcgacttaatcttgataagccacaagttcgactaact
agctttgaccgaccaaatatacgttacacggtagttgaaaggcttaatcctttagaacaa
gtctcttcctttcttactaaccaaaaaggtaatagtggcattatctattgttcaagccgg
gccaaggttgatgatatggcctcacgtttagctaatcgaggttatagcgttgccgcttat
catgcgggactcactacgcaagagcgagcaaatgcgcaagagcgatttttaaaagatgac
gttgctataatggttgcaaccgttgcgtttggtatgggcattaataaacctaatgttcgc
ttcgttattcatgctaatgcaccaagaacgattgaagcctactatcaagaaaccgggcga
gctggccgtgatggattacccgctgaagcaatattattaaataatgaacgtgactttaac
tggtatcaaaccgttattgctgaaaaagaagaaggatttcataaatcagttgagctacat
aagcttagcgagatgattgcatttacccaagcgcaaacatgccgccgaattgtattactt
aactattttggagaacaccgcgtagaaaaatgtaacaactgcgacgtttgtttatacccg
ttagagcattataacggattagttgatgcacaaaaaattctatcatgcgtatatcgtgta
ggtcaaaattacggtacacagtatattgttgatgtattacgaggctcaaatcggagtttg
attaaagaaaacggtcataatacattatctgtgtatggcattggcaaagaacattcggct
gactattggacgagtattatacgccagcttattcacctagggtatttgaaacaagatcca
acttcattttcagccttatttttgagtgaagaggctcgtaatgtattacgcggtgatatt
agcttatcactcgttaaacctcgattagaattagtaaaaagaacacggcaaaaccgctat
gccagatcgattaatcaaacaacgattttatcttacgaagagcgcagtttatttaataat
ttaaaacggctaagaaaagagattgccgatatggatgatgttgcaccttatattattttt
agtgatgaatcattactcgaaatggtaaaaactcagcctgaaagtaaacgagaattatta
ggaataactggcgttggtaaaataaaattagaaaaatatggtgagctttttcttgatgaa
attgaaaaattcattaccgctaattaa
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