Orbus wheelerorum: RHO14_08070
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Entry
RHO14_08070 CDS
T10511
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
owh Orbus wheelerorum
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
owh03400
]
RHO14_08070 (phrB)
Enzymes [BR:
owh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHO14_08070 (phrB)
DNA repair and recombination proteins [BR:
owh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHO14_08070 (phrB)
Prokaryotic type
RHO14_08070 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Rop-like
Motif
Other DBs
NCBI-ProteinID:
WVD70310
LinkDB
All DBs
Position
complement(1794618..1796036)
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AA seq
472 aa
AA seq
DB search
MATHLVWFRNDLRVTDNSALYHACQEPNAKVIAIYIATPTQWQTHHMSARQAWFIFQHLQ
QLQQNLAELNIELIYQEVDTFDDSIAIIETVCQQRAVTDLFYNKQYQWHERQRDNALLGQ
PAMANVNCHAFDDSVFFAPGRITTDAGKMYQIYTPFRNKFYEHLQNNVIKVNRKPAKRQQ
ELLVELTALKPFSYPMQTSQYAPIGEQQAIMRLQQFCREEVDLYLNLRDFPRLSATSELS
AYLAIGVLSVRQCLARLQLERPEFTQSKSSGAFGWFNQLIWREFYLHLLFIYPKLSKNQP
FIDWTKRVQWRRNEQDFVAWQTGQTGYPIVDAAMRQLNQTGWMHNRLRMITASFLVKDLL
IDWRRGEDYFMSQLIDGDLALNNGGWQWAASTGNDAAPYFRIFNPTTQSKRFDIDGQFIL
KYLPELAQVPIDAIHEPHKWAQKNKITLNYPEPIVEHASARLYTLAAYNAAK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcatcttgtttggtttcgtaatgatttaagagtaactgacaactccgcactt
tatcatgcttgccaagaacccaacgcaaaagtgattgctatttacattgcaacgccaacg
cagtggcaaacgcaccacatgtcagcacgtcaagcatggtttatttttcagcatttacaa
cagttacaacaaaatttagccgaacttaatattgagcttatctatcaagaggtcgatacc
tttgatgactcaattgccataatcgaaacagtttgtcagcagcgtgcggttaccgattta
ttttataataaacagtaccaatggcatgaacgtcagcgggataatgctttacttgggcag
ccagcgatggccaatgttaactgccatgcttttgatgattcggtcttttttgcaccaggt
cgcattaccactgatgcgggaaaaatgtatcaaatttatacgccatttcgtaataaattt
tatgaacacttacaaaataacgtgatcaaggtaaatcgcaagccagcaaaaaggcagcag
gaactattggtcgaactaaccgcgctcaaaccatttagctacccaatgcaaacaagtcaa
tatgcccctattggcgagcaacaagcgattatgcgccttcagcaattttgccgtgaagag
gttgatttatatcttaatttacgtgattttccgcgtttatctgcaacgagcgagctttct
gcctatttagcaattggcgttctttcggtaaggcaatgcttggcgaggttacagcttgaa
cgccctgaatttacgcagtcgaaatcaagtggtgcctttggctggtttaaccaacttatt
tggcgtgaattttacctacacttactgtttatttatccaaaactatcaaaaaaccagcca
tttattgattggaccaagcgagtacaatggcgccgaaatgagcaagactttgtggcatgg
caaacagggcaaacgggttaccccattgttgatgcagcaatgcgccagctcaatcaaacc
ggatggatgcataatcggttaagaatgatcaccgcaagctttttagttaaagatctatta
atcgattggcgccgtggtgaagactattttatgtcacaacttattgatggcgacttagca
cttaataacggtggctggcaatgggccgcctcaacggggaatgacgctgcgccttatttt
cgaatttttaatcccactacgcaaagtaagcgctttgatatcgatggccagtttattctt
aagtatttgcctgaacttgcgcaggttccaatagacgcgatacatgaaccacataaatgg
gctcaaaaaaataagatcacgctcaattatccagagccgatagttgaacatgcgagcgcc
agattatacacactagccgcatataatgccgctaaatag
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