Orbus wheelerorum: RHO14_09450
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Entry
RHO14_09450 CDS
T10511
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
owh Orbus wheelerorum
Pathway
owh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO14_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
owh03019
]
RHO14_09450
Enzymes [BR:
owh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHO14_09450
Messenger RNA biogenesis [BR:
owh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHO14_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
ERCC3_RAD25_C
UTP25_NTPase-like
MALT1_Ig
Motif
Other DBs
NCBI-ProteinID:
WVD70578
LinkDB
All DBs
Position
2120095..2121309
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AA seq
404 aa
AA seq
DB search
MSFDSLGLTTEILKALQEQNFTTPTPIQKQAIPIVLSGKDLIASAQTGTGKTAGFALPIL
QKLTELQINTSKNDDSRKSKRPLHALILAPTRELAAQIGDNIRDYSRYLSIRSLVVFGGV
SINPQMMKLRGGVDILIATPGRLLDLVQKNAVDLSTVKVLVLDEADRMLDMGFIHDIRRV
IAKLPKKRQNLMFSATFSNEIKGLSQTILHEPETIAVAKENSTSEQIKQYVHHVDKSRKR
ELLSYLIGKNQWQQVLIFTRTKYGANHLAEQLTKDGIKTSAIHGNKSQGARTKALADFKT
GQIKALVATDIAARGLDIELLPYVVNYDLPQVAEDYVHRIGRTGRAQNSGQAVSLVCIDE
LPQLKAIEKLIKTSIPEMKTDGFTVNPHIKAAPKQKITQRSNKK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattcacttggtttaactaccgagattttaaaagcacttcaagaacaaaat
tttacaactccaacgccaattcaaaaacaagctattccgattgtactttcaggtaaagat
ttaatcgccagtgcacagacaggaacggggaaaacagctggatttgctttgccgatttta
caaaaattaacagaattacaaattaacactagcaagaatgatgatagcagaaaaagcaaa
agacctttacatgccctaatcttagcaccgactcgtgaacttgctgctcaaatcggggat
aatattcgtgattacagtcgttatttaagtattcgctcattagttgtatttggtggcgtt
agtattaatccacaaatgatgaaactacgaggtggcgttgatatactaattgcaacacct
ggtcgattattagatttagtacaaaaaaatgctgttgatttatctaccgttaaagtattg
gtattagatgaagcagatcgcatgttagacatgggatttattcatgatattcggcgtgta
attgctaaattaccgaaaaagcgacaaaatttgatgttttcagctaccttttctaatgag
ataaaaggactatcgcaaacaattttgcatgaaccagaaacaattgccgtcgcaaaagaa
aatagtacttctgagcaaattaagcaatatgttcatcatgttgataaaagccgtaaacgc
gaactattatcttatttaattggtaagaatcaatggcagcaagtgttaattttcactcgg
actaaatatggtgccaaccatttagctgagcaactgactaaagatggtattaaaacatca
gcaattcatggcaataaaagtcaaggagcaaggacaaaggccttagctgattttaaaact
ggacaaataaaagccctagttgcaacagatatagctgcgcgcggactcgatatcgagcta
ttaccttatgttgttaattatgacttaccacaagttgctgaggactatgttcatcgtatc
ggtcgaacaggaagagctcaaaatagtggtcaagccgtttcacttgtttgtattgatgaa
ttaccgcaattaaaagcaatagaaaaattaataaagacatcaattcctgaaatgaaaacc
gatgggtttaccgtaaatccacatataaaagcagcaccaaaacaaaaaataacccaacga
tcaaacaaaaagtga
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