Orbus wheelerorum: RHO14_09545
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Entry
RHO14_09545 CDS
T10511
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
owh Orbus wheelerorum
Pathway
owh03018
RNA degradation
Brite
Enzymes [BR:
owh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHO14_09545
Messenger RNA biogenesis [BR:
owh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHO14_09545
Ribosome biogenesis [BR:
owh03009
]
Prokaryotic type
rRNA helicases
RHO14_09545
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Gene cluster
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Other DBs
NCBI-ProteinID:
WVD70597
LinkDB
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Position
complement(2143604..2145448)
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AA seq
614 aa
AA seq
DB search
MTKEISFIDLGLSEEILNALNDLGFIKPSPIQSECIPLLLNGHDVLGMAQTGSGKTAAFS
IPFLMKLDPNLKAPQVLVLAPTRELAIQVADACSEYAKHMKGVKVLALYGGQRYDVQLRA
LKQGPQIVVGTPGRLLDHLNRKTLDLSNLKGLVLDEADEMLRMGFIDDVESIMAAIPDDH
QTALFSATMPAPIRRITKRFMQNPQEIQIKSTNQTAPDIDQSYWLVRGLRKNEALVRFLE
AEDFDAAIIFVRTKSATLDVADVLEQHGYNAAALNGDMTQQLREQTLDRLRNGRLDILIA
TDVAARGLDVERISLVINYDITLDSESYVHRIGRTGRAGRAGRALLFVDSRERRLLKNIE
QTIKKAIPEVQLPGKESLESRRLTKFADKVAKEITANDLDNYRSILPKLLKDDQTDMETL
AAALLKLAQGERPLILPPDPVFKPARNDRDRPERGERSDRGDRRLKGDSREAPKRRERRD
VGEMDLYRIEVGKENGVDVRNIVGAIANEGDISSRYIGNIKLYEKYSTVELPKDMPKDLL
KHFEGVRVMNIPMNMRLAVEGGDKPAPRRSRSKQDDSFADQPKRRSRSVSGSKDGAKEGA
PKRRAPRKPTSFND
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaatttcttttattgaccttggtttatccgaggaaatccttaacgcatta
aatgatcttggctttatcaagccatcgccaattcaatctgagtgtattccattactatta
aatggacacgatgtacttggaatggcacaaaccggtagcggtaaaactgctgcattttca
attccatttttaatgaaattggatcctaatttaaaagccccacaagtattagttttagcg
ccaacgcgcgaacttgctattcaagttgctgatgcatgtagcgaatatgctaaacatatg
aagggtgttaaagtattagccctttatggtggacaacgttacgatgtgcaattacgtgca
ttaaaacaaggaccacaaattgttgttggtacgccaggtcgtctacttgaccatttaaat
cgcaaaacattagatttatcgaatttaaaaggtttagtacttgatgaagctgatgaaatg
ttacgtatgggctttattgatgatgttgaaagcattatggctgcgatccctgatgatcac
caaactgcattattttcagcaaccatgcctgcaccaattcgtcgaatcactaaacgattt
atgcaaaatccacaagagatccaaattaagtcaactaatcaaacagcgcctgatattgat
caaagctattggttagttcgtggcttacgtaagaatgaagcattagttcgtttccttgaa
gctgaagactttgatgcggcaattatctttgttagaaccaagtctgcaaccttagatgta
gccgatgtgcttgagcaacatggttataatgcggcggcacttaatggtgatatgactcag
caattacgtgagcagacacttgatcgtttacgtaatggtcgtctagatattcttattgca
actgatgtcgcagctcgtgggctcgatgttgagcgcattagcttagtaattaactatgat
attactttagattcagagtcttatgtgcatcgtattggtcgtaccggacgagctgggcga
gctgggcgcgcactgttatttgttgatagtcgtgaacgtcgtttattgaaaaatatcgaa
caaacaatcaaaaaggcaattccagaagttcaacttccaggaaaagagtctttagaatca
cgtcgattaactaaatttgcagacaaagttgccaaagaaatcaccgctaatgatttagat
aattatcgtagtattttacctaaattgttaaaagatgatcaaactgatatggaaacgtta
gccgctgcgctattaaaattagcccaaggtgaacgaccattaattttaccaccagatcct
gtatttaaacctgctcgtaatgatcgtgatagaccagaacgaggtgagcgcagtgatcgt
ggcgatcgtcgcttgaaaggtgatagccgtgaagcaccaaaacgtcgtgagcgccgtgat
gtcggtgagatggatctttatcgtatcgaagttggtaaagaaaacggtgtcgatgtacgt
aatattgtcggtgcaattgccaatgaaggtgatattagcagccgctatattggtaatatc
aaattatacgaaaaatattcgacggtagaattaccgaaagatatgccaaaagatttatta
aaacatttcgaaggcgttcgtgtgatgaatataccaatgaacatgcgattagccgttgag
ggtggtgataagccagcaccaagacgtagtcgtagtaaacaagatgattcttttgctgat
caacctaaacgtcgtagccgttcggtgtcaggtagcaaagatggtgctaaagaaggcgcg
ccaaaacgccgagcgccaagaaagccaacatcttttaacgattag
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