Orbus wheelerorum: RHO14_09815
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Entry
RHO14_09815 CDS
T10511
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
owh Orbus wheelerorum
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
owh03016
]
RHO14_09815
Enzymes [BR:
owh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RHO14_09815
Transfer RNA biogenesis [BR:
owh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHO14_09815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
TetR
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WVD70647
LinkDB
All DBs
Position
2213668..2215626
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AA seq
652 aa
AA seq
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MPITPTSDNIMLQDNPLLAQLKQKFHSQTPRAEGVVKAHEKGYGFLETDNKKSYFIAANK
MKKVIEGDKVSGILVQNGDKTAFEPETLLESAFEIFLGQVHFNNQIMEITPENAAKLSIK
CKVSHDVKQQLKDGDWVKARLTSHPLKDNNPFFAEITHFISEHHAIDLIWLLALARYNLD
SLAPADIDANLQDDTHLSRLDLTNTFFFTIDGKDTHDMDDALSIDKDEQGNYHLTVAIAD
PSCYIDEDSKLDNIACQRSFSTYLPGFTVPMLPTSFANELCSLKENQKRPALICKVTISQ
QGDIVYDSVQFQLAWIISKAKLSYDDVSDFIDNNEPLLSNDGQLSQQLHWLSELANSRTN
WRNDHALLFKNNHEYRFIFDDNKQLIAVNKELKQTAHKMVEEAMVVANQVFSHQLKTNLG
FGIFNIHLGFDSKYYDSVIKLLAENKIEGFDKERLSSFDGYKDLRHLIENNELLEYRLRR
FQSQTDFSIEPNAHFALGFDAYATWTSPIRKYGDLFNHRLIKAMLTKQTHTKPDEQILSI
MNERRKAIKLAEREVNNKLYCQFLSDKIGQSFEAQIINLNRGGIKARLTDNGAVVFIPAS
LIHAVRTELTLLPEDGQIKIKDELKYQLLDTIAVTINEIKAENLTIIGKITH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcacccctacttctgataatattatgctacaagataatccattacttgcacaa
cttaagcaaaaatttcattcacaaacacctcgcgcagagggcgttgttaaagcacatgaa
aaaggctatggttttttagaaaccgataataaaaaaagctattttattgcagccaataaa
atgaaaaaagtgatagaaggtgacaaagtttcgggaattttagtacaaaatggtgataaa
acggcttttgagccagaaacattacttgaatctgcattcgaaatttttttagggcaggtg
cattttaataatcaaataatggaaattacccctgaaaatgcagcaaagctttcgattaag
tgtaaagtaagccatgatgttaaacagcagcttaaagacggcgattgggtaaaagcacga
ttaacctcgcatccgcttaaggacaataatcctttctttgctgaaattacacactttatt
agcgagcatcatgcgattgatttgatctggcttttagcgcttgctaggtataatcttgat
tcattagccccagcagatattgatgctaacttacaagatgatactcatttaagccgcctt
gatttgactaatactttcttttttaccattgatggtaaagatacacatgatatggatgat
gcgttatcaatcgataaagatgagcaaggcaattaccatttaaccgttgcgattgcagat
ccgagttgctacatagatgaagatagcaaattagataatatagcttgtcaacgtagcttt
tctacttatttgccgggctttactgtgccgatgctaccaacctcatttgccaatgaactt
tgttccctaaaagagaatcaaaaaaggcccgcgttaatttgtaaagtgactatcagccaa
caaggcgatattgtttatgattcagtgcaatttcagttagcctggattatatctaaagct
aaactcagttatgatgatgtttcagattttattgataataatgagcctcttttaagcaat
gatggtcagctttcacaacagttacattggttgtctgaacttgcaaatagccgaaccaat
tggcgtaatgaccatgctttactatttaagaataatcatgaatatcgctttatttttgat
gataacaaacaactcattgcggttaataaagaactcaaacaaactgcacataaaatggtt
gaagaggcaatggttgttgccaatcaagtttttagccatcagttaaaaacgaacttagga
tttggtatttttaatatccatttaggctttgattctaagtactatgactcggtaattaag
ttattggcagaaaataaaatcgaaggctttgataaagagagactctcttcttttgatgga
tataaagacttgcgccacttaattgaaaataatgaattacttgagtatcgccttaggcgt
tttcagtctcaaaccgatttttcaatcgagccaaacgcgcactttgccttagggtttgat
gcttacgcaacttggacatcacctattcgaaaatatggtgatttatttaatcaccgctta
attaaggcaatgctaacgaagcaaacccatacaaagcctgatgaacagattttatcaata
atgaatgaacgacgtaaagccattaagcttgccgagcgtgaagttaataataaattatat
tgtcagtttttgtctgataaaataggtcaatcgtttgaggctcaaattattaaccttaat
cgtggtgggataaaagcgcgtttgaccgataatggcgccgttgtctttattcctgcatca
ttaattcatgctgttcgcacggagttaacactattacccgaagatggccaaataaaaatt
aaagatgagctaaaatatcagttactcgatacgatagccgtcacaattaatgaaattaaa
gctgagaatttaacgattattggtaaaataacgcattaa
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