Orbus wheelerorum: RHO14_12560
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Entry
RHO14_12560 CDS
T10511
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
owh Orbus wheelerorum
Pathway
owh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHO14_12560 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
owh03021
]
RHO14_12560 (rpoA)
03400 DNA repair and recombination proteins [BR:
owh03400
]
RHO14_12560 (rpoA)
Enzymes [BR:
owh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHO14_12560 (rpoA)
Transcription machinery [BR:
owh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHO14_12560 (rpoA)
DNA repair and recombination proteins [BR:
owh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHO14_12560 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
WVD71158
LinkDB
All DBs
Position
complement(2847059..2848048)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVDVVQYNHTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDVLDILLNLKKLAIKVHNKDDVMLTVNKSGAGVVTAADITHDGD
VEIVNPDLVICHLTDANASISMRIRVQRGRGYVPASARVRAEDDERPIGRLLVDACFSPI
DRIAYSVEAARVEQRTDLDKLVIDMETNGTIDPEESIRRASTILAEQLEAFVDLRDIRQP
EVKEDKPEFDPILLRPVDDLELTVRSANCLKAEAVHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIVED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagagtttttaaaacctcacctagttgatgttgttcaatataat
catactcatgcgaaagtgactttagagccacttgagcgagggtttggtcatacactaggc
aatgcactgcgccgtattttattatcatcaatgccgggatgtgctgtaacggaagttgag
atcgatggcgtattgcatgaatacagtactaaagaaggcgtccaggaagatgtgcttgat
attcttctcaatttgaaaaaattggcgatcaaagtacacaacaaagatgatgtaatgctt
acagtgaataaatctggcgcgggtgttgttactgctgctgatattactcatgatggtgat
gttgaaatcgtcaatcctgatcttgtgatctgtcatctcactgacgctaatgcttcaatt
agtatgcgtattcgtgtacaacgaggccgtggatatgttcccgcttctgctcgagttaga
gctgaagatgatgaacgtccaattggtcgtttattagttgatgcttgtttcagtcctatt
gacaggattgcatattctgtagaagctgcccgtgttgaacagcgtacggatttagataaa
ttagttatcgatatggaaactaatggaactattgatcctgaagagtcaattagacgtgcc
tctacaattttggctgaacaacttgaagcttttgttgacttaagagatattcgtcaacct
gaagtaaaagaagacaaaccagaatttgatccaattttactacgacctgtagatgacttg
gaattaactgttcgatctgcaaactgcttaaaagcagaagcagttcattacattggtgat
ttagttcaacgtactgaagttgagttattaaaaacccctaatcttggtaagaaatcactt
actgaaattaaggatgtactcgcttctcgtggtttatctctaggcatgcgtcttgagaat
tggccgcctgcaagtattgttgaagactaa
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