Orbus wheelerorum: RHO14_12735
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Entry
RHO14_12735 CDS
T10511
Symbol
dacB
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
owh Orbus wheelerorum
Pathway
owh00550
Peptidoglycan biosynthesis
owh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
owh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHO14_12735 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
owh01002
]
RHO14_12735 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
owh01011
]
RHO14_12735 (dacB)
Enzymes [BR:
owh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RHO14_12735 (dacB)
Peptidases and inhibitors [BR:
owh01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
RHO14_12735 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
owh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RHO14_12735 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WVD71193
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All DBs
Position
2869685..2871151
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AA seq
488 aa
AA seq
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MKKIVFILISVILGSISYSYANDQAELSSYLSLLPKGTDLSILVETVEKKPSTLISYQSD
QFKQPASVQKLITALAAELELGADFRFITRLQTNGKISNRQLKGDLIIQMSGDPTFTRKQ
LNEMLMVLKLKGVDKITGNIIIDSSIFMGHDKASGWSWNNLTSCYNTAPSATIIDGNCFY
AGILPAQNIGEKATTSVSSIYPVTLTSNILTISNKSESFADKYCELDMIASEKNRYHLAG
CVKHSSQKSYLKFAITDGFDYLSSILKTELAQKKIKFSGRITETKEPITKSLVPLAINQS
APLSELLTIMLKKSHNLIADTLYRTIGAHYFKIPGTWQNSSDAIKAILLQKADIDLANAV
IVDGSGLSRLNLIDADKLMQVLQYIAANNDTLKIVEMLPIAGIDGTLQYRRSFANNELKS
IIYAKTGYLEGNYNLAGFLKTNENQYIAFIQFISGYNHLNNPNEPKNSAIVKFEKAFYQN
LLEENKID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagtttttatcctaattagcgtaatacttggcagcattagttatagctat
gcaaatgaccaagcagaactatcttcatatttatcacttttaccgaaaggtactgattta
tcaattcttgttgaaactgtcgaaaaaaagccctcgacactaattagctaccaaagtgat
caatttaagcagcctgccagtgttcaaaaattgattacggcacttgccgcagaacttgag
ttaggcgctgattttcggtttattactcgcttacaaaccaatggcaagattagtaatagg
cagctcaaaggcgatctaattattcaaatgagtggtgatccaacctttactcgcaaacaa
cttaacgaaatgttaatggtattaaaactcaaaggggttgataaaataacgggtaatatt
attattgatagctcgatatttatgggtcatgataaagcttctggctggtcttggaacaac
ctaacttcatgttataatactgcaccatcagccaccatcattgatgggaactgtttttat
gctggaatattaccggcacaaaatataggtgaaaaagcgacaacttcagtatcatcgatt
tacccggtgacgctcactagtaatattttaacgataagtaataagtcggagtcatttgcc
gacaaatactgtgaacttgacatgatcgccagcgaaaaaaatcgctatcatttggcgggc
tgcgttaagcatagcagccaaaaaagttaccttaaatttgccataactgatggatttgac
tatttatcatcaatactaaaaaccgagcttgcacaaaaaaagatcaagttttctggtcga
attactgaaacaaaagagccgatcacaaaatcactggtacctttagcgattaatcagtca
gcaccattatctgaattactgacaattatgctcaaaaaatcacataatttaatcgcggat
acgctctatagaacaatcggtgctcactattttaagatcccaggaacatggcaaaactca
agtgatgcgataaaagcaatattacttcaaaaagccgatattgacttagctaatgccgta
attgttgatggttcaggcctatcaaggctaaatcttattgatgcagataaactcatgcag
gtactacaatatatcgcggcaaataacgataccttaaaaatagttgaaatgttacccatt
gcaggtattgatggtacattacaataccgcagaagctttgcgaataatgaattaaagtca
attatctatgcaaaaacaggttacttagaaggcaactataaccttgctggttttctaaaa
accaacgagaatcaatatattgcctttattcagtttatttctggttataatcaccttaat
aatccaaatgaacctaaaaacagcgcgattgttaaatttgaaaaagcgttttatcaaaac
ttactagaagaaaacaaaatagattaa
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