Oxynema aestuarii: HCG48_01800
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Entry
HCG48_01800 CDS
T06528
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
oxy
Oxynema aestuarii
Pathway
oxy03410
Base excision repair
oxy03430
Mismatch repair
oxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCG48_01800 (recJ)
03430 Mismatch repair
HCG48_01800 (recJ)
03440 Homologous recombination
HCG48_01800 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oxy03400
]
HCG48_01800 (recJ)
DNA repair and recombination proteins [BR:
oxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HCG48_01800 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCG48_01800 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HCG48_01800 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF2009
OTCace
Motif
Other DBs
NCBI-ProteinID:
QIZ69475
UniProt:
A0A6H1TSQ6
LinkDB
All DBs
Position
419212..421539
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AA seq
775 aa
AA seq
DB search
MPDPTLRRRTQAKLPNHRWKIYPQFPQLAEELAQAISPDFSPVLAQVLIDRGMTTVEAAQ
GFIHPDSLDLPSPLDDFPALDESINLLIHAIATNKKIAICGDYDADGMTSTALLLRALRY
LGANVDYAIPSRMKDGYGINERIVEEFHREGVKLILTVDNGIAAFKPIVLARNLGLDVIV
TDHHEVPPEVPPATTILNPKLIREDSPYRGVAGVGVAYILAVCLAQKLKKAQPLINPLRE
LLTLGTIADLAPLTGVNRRWLKWGLRQLPNSKLAGVQALIQVSGATSSASKQGRAMKPDE
IGFRLGPRINAVGRIGDPQIVIELLTTDDRGVALERAMQCEQINARRQEMCEEIEREAIA
WVESSNIDLGDRRVLLVVKSGWHHGVIGIVASRLVERYGVPVFIGTYEDAEKTHVRGSAR
GIPEFDVFEALQFCDDLLGKYGGHRAAGGFSLSGDNLQAFGDRLSQFACHCLDPSHLKPA
IAIDTALDFDRINLQFYREIDALHPCGIENPAPVFWTGNAKVVEQRIVGKGHLKLTLETD
GSPANRIQAIAWRWGEYYPLPPRVDVAYKLRENVWNGETSIELELVSARFPEVAPPAQPI
LVNPEAPPVSVRPEWLAGPPLEDLFGQLQGRVFVYGDGRPSAGPTHAAIDYDRPQGVCET
FIFWTLPPSLTHLKWFLAKGQPQQIYIYSQLPSLPSPEKLRSLLSEYLTRSPGSPLHLLK
FSQAHWVAPSTVLAALRELGYPCKDFPKTDSLVRELERLHRWYGFSPAKLGKIRF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcctacgcttcgtcgccgaactcaagccaaactaccgaaccatcggtggaaa
atttacccgcaattcccccaactcgccgaggaattggcgcaggctatttctccggatttt
tccccggttttagctcaagttttgatcgatcgcgggatgaccaccgttgaggcggcccaa
ggtttcatccatcccgattctctcgatcttccttcgccgttagatgattttcccgccctc
gacgaaagcattaatttgctgattcacgcgatcgccacgaacaagaaaatcgcgatttgc
ggcgactacgacgccgacgggatgaccagtacggccctgttactgcgcgccttgcgctac
ctcggcgccaatgtcgattatgccatccccagccgcatgaaagacggttatggtattaac
gaacgcattgtcgaagaattccaccgggaaggggttaaactgattctgaccgtcgataac
ggaattgcggcgttcaaaccgatcgttttggcgcgcaatctcggtttggatgtcatcgtc
acggaccatcacgaagtcccgcccgaagttccccccgccaccaccattctcaacccgaaa
ctgattcgcgaagattctccctatcgcggggtcgccggggtcggcgtcgcctatattttg
gcggtctgtctggcgcaaaaattaaaaaaagcccaacccctgattaatcccttgcgcgaa
ttgctgaccctgggaacgatcgccgatctggcgcccctgactggggtcaatcgtcgctgg
ttgaaatggggattgcgccagttaccgaattctaaattagcgggggtgcaagctttaatt
caagtgtccggggcgacgagtagcgcctcgaaacaagggcgggcgatgaaaccggacgag
atcggatttcgtctcggaccgcgcatcaatgcggtggggcgcatcggcgacccacaaatc
gtcatcgaactgctgactacggacgatcgcggggtggccctggaacgggcaatgcagtgc
gaacaaattaacgcccggcgccaggaaatgtgcgaggagatcgaacgagaggcgatcgcc
tgggtggaaagtagcaacatcgatttgggtgatcgccgcgtcctgctggtggtcaagtcc
ggatggcatcatggggtcatcgggattgtcgcctcccgcttggtagaacgctacggcgtc
ccggtgtttatcgggacttacgaagatgcggaaaaaacccacgttcgcgggtcggcgcgc
ggaattccggaattcgacgtgtttgaagcgttacaattttgcgatgacttgctcggtaaa
tacggcggtcatcgggcggcgggcggcttttcactcagtggcgataacttgcaagcgttc
ggcgatcgcctcagccaatttgcctgtcactgtctcgatccgtctcacctcaaacccgcg
atcgcgatcgataccgccctcgacttcgatcgcattaacttgcagttttaccgcgaaatc
gatgcccttcacccctgcgggatcgaaaacccggccccggtcttttggacgggtaacgcg
aaggtggtcgaacaacggatcgtcggaaaaggtcatctgaagctgactttagaaaccgac
ggttcccccgccaaccggattcaggcgatcgcttggcgctggggcgaatactatcccctg
ccgccgcgcgtcgatgtcgcctataaattgcgcgaaaatgtctggaatggggaaaccagc
atcgaactcgaactggtcagcgcccgctttcccgaagtcgcgcccccagcgcagccgatc
ttggtcaatcccgaggcgcccccggtctccgtccgcccggaatggctcgccggaccgcct
ctagaggacttgttcgggcaactgcaagggcgggtcttcgtctacggggacgggcgcccc
agtgcgggaccgacccacgccgcgatcgactacgatcgcccccaaggggtctgcgaaacc
ttcattttttggacgctgcccccgtctctcactcacttaaagtggtttttagcgaaaggg
caaccccagcaaatttatatatatagccagctcccctcactaccgtcgccggagaagctg
cgatcgctcctgagcgaatacctcacgcgatcgcccgggagtccgttgcacctgctcaaa
ttttctcaagcccattgggtggcgccgagtacggtgctggcggcgttgcgcgaactcggc
tatccttgcaaggattttccaaaaaccgattccctcgtccgggaactcgaacgcctgcat
cgctggtatggcttctctccggcgaagttaggcaaaatccgcttttag
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