Oxynema aestuarii: HCG48_03025
Help
Entry
HCG48_03025 CDS
T06528
Name
(GenBank) PAS domain S-box protein
Organism
oxy
Oxynema aestuarii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
EAL
PAS_9
PAS
PAS_4
GGDEF
PAS_8
PAS_10
Diguanyl_cycl_sensor
sCache_3_3
Cache_3-Cache_2
Motif
Other DBs
NCBI-ProteinID:
QIZ69678
UniProt:
A0A6H1TSU3
LinkDB
All DBs
Position
complement(733601..738373)
Genome browser
AA seq
1590 aa
AA seq
DB search
MGLVGHQRDRASTNRNLEKQSSKYTQKTTESSLQTRARPLPWLELPDPREKMFEGQSIYQ
QIGRDLPIAMALVRPSDGVIVYANPRLEKLFGYEDGQLVGCQTLQLYWNPNQRAELVQSV
SERGEISDWPLLAKKIDGSPIWVSMNARQQPIADEALFLKTFIDITHFKQAKDTLKVLLD
SPLGDGGTTCLGELARYLALAVGARSAFVAELVGGNDRPARIWVGNPQQPIQIQCSGCEC
LPQGEYWLNQTPWAQVLDLGQGSGWLPPEVVCFTDAFDSDGEPPCQYFGVRLEGRDGRAL
GLVGLIGDRHWSADEETDSILRCFAARATAELERRQLEEALQLERRKQQLTVEGGSILTY
TLDLRGRPLQIEGSAPGILGGERVASAEENRAEIEAELAFDRYRQRPEISRAIARGLAGR
AETWVESADGSLYRHETHPLYNTFGDPIGLFGKVRELPPTAAIYQGSRDPIAPQTESDLF
VGGPVTVFQWQPRENWPVASVSPNVTQFGYHPQTFIEEGLCYAEIVHPDDLPRVAAEVEQ
FLAAGQDRFEQNYRICCANGESRWIRDFTVVVRDRHGEILHYRGYIVDITVSEATPKAFR
QQALFALQESETRLRQALQAARMGVWDWERHSNRVTWSLGVEGMFGLPPGCFGDRPESYW
QYVHPDDRATVRKAVMRAVSAKTNYYNEHRLLDPASGRVRWIAFQGDVVCDEAGAVLRMT
GTVVDISDRKQTEAALTQSEAHFRAILNSSLQAVVFIDCDYRIQVFNKTARLATEAVWQK
TIQPGDSIYEYVAPEDLEDFNRDFHAALAGHCISTQRNIRGNGTEDNWFEVSYYPVFDEN
DRVIGVCFIALDITERKAAVDALYRSEERFRSLVQYSSDTIAILTDRGAIAYTSPSSEKI
LGYTPEQLIGKNVFEYIHPDDRHSFQELFLTALARPDFLVEIECRFLHGNGEWIYLESVG
SNRLDDPSIRGFVVNARDVTDRHQQEEWLKLLERAIAASNNGIVITDACAGDNPVVYVNR
AFEEITGYRSAEVLGKNCRFLQGKNRDTTVLNRLRSAIRNGEDCTVILQNYRKDSTPFWN
ELRLSPVKNDRGRLTHFIGVQIDITERKNAEEKLIHQAYYDALTGLPNRALFMEQLHAAS
QRVKDRSDRLFAVLFIDLDRFKIVNDSLGHAIGDMLLVAIAYRLQKGLAELEGISSLAEA
IDPPPPVAESLYNYRQSSSRRRSANFTVARLGGDHFTILLDNLHSLEEATVVAESIHAQL
SAPFTFSGHEVFVTASIGIALSTTDYDAPADLLRNADLAMYAAKAAGKARYAVFDKAMHD
RAVQRLQLENDLRRTLHDLETEGKTDLFLTYQPIVSLIDGHLVGFETLVRWQHPQKGLIS
PAQFIPLAEENGTIVPLGEWVLYEACQQLVRWQRDYPHACEHLSLSVNLSGKQFLQPDLV
ENIDRTLRETGLNPEALKLEITESVLMRDTEAATKTLLELKKRRIHLCLDDFGTGYSSLS
HLAQFPIDTLKIDRSFVSRMISEGKDLEIVQAIVSLAHALDMNTIAEGIETAGQLVQLKS
LGCQQGQGYWFSKPVDTDRATQLIRSSNRP
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgggattagtcggacatcaaagggatcgcgcctcgactaaccgcaatttagaaaagcaa
agttctaaatacactcagaagacaacggaaagcagcctgcaaacacgggcgagacccttg
ccgtggctggaattgcccgaccctagagaaaagatgttcgagggacagtccatttaccaa
caaatcggtcgagacttacccattgcgatggccctcgtgcgccctagcgacggggtaatt
gtctatgccaacccgcgattagaaaaactattcggttacgaggacggccaactggtcggc
tgccaaacccttcaactgtattggaatccgaaccaacgggccgaactggttcagtccgtc
tccgaacgaggcgaaattagtgactggccactgttggccaaaaaaatagatggaagtccg
atttgggtgtcgatgaacgcgcgccaacagccgatcgccgacgaagccctcttcttaaaa
acctttatcgatattacccatttcaaacaagccaaagataccctcaaagtcctgctcgac
agccccctcggcgacgggggaacgacctgcttgggcgaattggcgcgttatttagccctc
gccgtcggcgcgcgatcggcctttgtcgccgaactggtcggcgggaacgatcgccccgcc
cgaatttgggtcggcaatccccaacaaccgattcaaatccaatgttccggctgcgagtgc
ctgccccaaggggaatattggttgaatcaaaccccctgggcgcaagtgctagacctcgga
caggggagcggttggttgccccccgaagtcgtttgctttaccgacgctttcgacagcgac
ggcgaacccccgtgccagtatttcggcgtgcgcttggaaggtcgcgacggtcgggccttg
ggactggtcggactgatcggcgatcgccactggtccgccgatgaagaaaccgactcgatt
ttacgctgtttcgccgctcgcgccaccgccgaactcgaacggcgccagctcgaagaagcc
ctacaactagaacgacgcaaacagcaactcaccgtagaaggcggatcgatcctcacctac
accctcgatctgcgaggacgaccccttcaaattgaaggatccgcgcccgggatcctcggc
ggcgaacgagtcgcgtctgccgaggaaaatcgcgccgaaatcgaggcagaattggcattc
gatcgctaccgccagcgtccggaaatctcccgggcgatcgcccgaggactcgcgggtcga
gccgaaacttgggtcgaatccgccgacggcagcctctaccgccacgaaacccaccctttg
tataacaccttcggagatccgatcggcttatttggcaaagtgcgagaattgccccccacg
gcggcaatataccaagggagccgcgacccgatcgccccccaaaccgaaagcgatctgttc
gtcggcggcccggtcaccgtattccaatggcaaccccgagaaaactggcccgtagcatcg
gtctcacccaacgttacccaattcggctaccatccccaaacctttatcgaagaaggcttg
tgctacgccgagatcgtccatcccgacgacttgccccgggtcgccgccgaagtcgaacag
ttcctcgccgccggacaagaccgcttcgagcaaaattaccggatttgttgtgcgaacggc
gaaagtcgctggattcgcgattttaccgtggtcgtgcgcgatcgccacggcgaaatcctc
cactatcgcggctatatcgtcgatatcaccgttagcgaagcgacgccgaaggcgtttcgc
cagcaagccctgttcgccttgcaagagagcgaaacgcgactgcgccaagccctgcaagcc
gcccgtatgggggtttgggactgggaacgccacagcaaccgcgtcacctggtctctcggc
gtcgaggggatgttcggactgccccccggctgttttggcgatcgcccggagtcctactgg
caatacgtccatcccgacgatcgcgccacagtccgcaaagccgtcatgcgcgccgtctcc
gccaaaacgaactactacaacgaacaccgcctgctcgatcccgcctccggtcgcgtgcgt
tggatcgcctttcaaggggatgtcgtctgcgacgaagccggggcagtcctccgcatgacc
ggaaccgtcgtcgatatcagcgatcgcaaacaaaccgaagccgccctgacccaatcggaa
gcccacttcagggccatcctcaattcttccctgcaagccgtcgtctttatcgattgcgac
tatcgcattcaagtctttaacaaaaccgcccgcctcgccaccgaagccgtttggcaaaaa
accattcagccgggagactccatttacgaatacgtcgcccccgaagacttagaagacttc
aaccgcgactttcacgccgccttagcgggccattgcatctccacccaacgcaacattcgc
gggaatggaaccgaggataactggtttgaagtcagttactatcccgtttttgacgagaac
gaccgagtcatcggcgtttgttttatcgccctcgacattaccgaacgcaaagctgccgtc
gatgccttgtatcgcagcgaagaacgctttcgatccttggtgcagtattcctcggacacg
atcgccatcctcaccgaccgaggggcgatcgcctacaccagtccgtcgagcgagaaaatt
ttaggatataccccggaacaattaatcggtaaaaatgtttttgaatatatccatcccgac
gatcgccacagctttcaagaattatttttaaccgccctcgcccgaccggattttctcgtc
gaaatcgaatgtcgctttctgcacggcaacggcgagtggatttatttagaatccgtcggc
agcaaccgcctcgacgatccgagcattcgcggttttgtcgtcaacgcccgggacgtgacc
gaccgccaccaacaagaagaatggctcaaactgctcgaacgggcgatcgccgccagcaat
aacggcatcgtgattaccgacgcttgcgccggagacaaccccgtcgtttacgtcaaccgg
gcttttgaagaaattaccggatatcggtcggcggaagttctcggtaaaaactgccgcttt
ttacaaggcaaaaaccgcgacaccaccgttttaaatcgcttgcgatcggcgattcgcaac
ggagaagactgcacggtgattttgcagaactatcgcaaagatagcacccccttttggaac
gagctgcgcctgtctccagtcaaaaacgatcgcggtcgattgacccattttatcggcgtt
caaatcgatattaccgagcgcaaaaacgccgaagaaaaattaatccaccaagcctattac
gacgccttgaccgggttgcccaaccgggcgctgtttatggaacagttgcacgccgccagc
caacgggtcaaagacaggagcgaccgcctgtttgccgtactgtttatcgatctcgaccgt
tttaaaattgtcaacgacagtttgggtcacgcgatcggcgacatgttgctcgtcgcgatc
gcctatcgcctgcaaaaaggactcgccgaactcgaaggaatctcctctctcgccgaggcg
atcgacccgccgcccccagtagccgaatctctatataactaccgccagtcttcctctcgc
aggcgatcggccaacttcaccgtcgcccgactcggcggcgaccacttcacgatcctgctc
gacaacctccacagtttggaagaagccaccgtcgtcgccgaaagcatccacgcccaactg
agcgcccccttcacctttagcggacacgaagtgttcgtcaccgccagcatcggcatcgcc
ctgagtaccaccgattacgacgccccggcagacctgctacgcaacgccgatctggccatg
tacgccgccaaagctgccggaaaagcccgttatgcggtcttcgacaaagccatgcacgat
cgcgccgtgcaacggttgcaactcgaaaacgacctacgccgcaccctccacgacctcgaa
accgaaggcaaaaccgacctcttcttgacctaccagccgatcgtctccctgatcgacggt
catttagtcggcttcgagaccctcgtgcgctggcagcaccctcaaaaaggcttgatttct
ccggctcagttcattcccctcgccgaagaaaatggcacgatcgttcccctcggggaatgg
gttctgtacgaagcgtgccagcaactcgtccgatggcagcgagattatccgcacgcctgc
gaacacctaagcctcagcgttaatttatcggggaaacagtttttacagcccgatttagtc
gaaaacatcgatcgcaccctgcgcgaaaccgggttgaatccggaagcgttgaaacttgaa
atcaccgaaagcgtgctcatgcgcgataccgaagccgccactaaaaccctgttagaactg
aaaaaacggcgcattcacctgtgtttggacgatttcggcaccgggtattcgtctttatct
catttggcgcaatttccgatcgataccctcaagatcgatcgctccttcgtcagtcggatg
atcagtgaagggaaagacctcgaaatcgtccaggcgatcgtcagtctcgctcatgcgttg
gatatgaacacgatcgccgaaggcatcgaaaccgcaggacaactggtgcagctcaaaagc
ttgggatgccagcagggccaaggttattggttttccaaacccgtcgataccgatcgcgcc
acccaattaattcgctcttccaatcgcccctaa
DBGET
integrated database retrieval system
