Oxynema aestuarii: HCG48_05095
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Entry
HCG48_05095 CDS
T06528
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oxy03032
]
HCG48_05095
03400 DNA repair and recombination proteins [BR:
oxy03400
]
HCG48_05095
Enzymes [BR:
oxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCG48_05095
DNA replication proteins [BR:
oxy03032
]
Prokaryotic type
DNA Topoisomerases
HCG48_05095
DNA repair and recombination proteins [BR:
oxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCG48_05095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ZapG-like
Motif
Other DBs
NCBI-ProteinID:
QIZ70026
UniProt:
A0A6H1TUY7
LinkDB
All DBs
Position
complement(1286703..1289306)
Genome browser
AA seq
867 aa
AA seq
DB search
MAKQLNLLSSGQVIPTALHAEMQQSYLEYAMSVIVGRALPDVRDGLKPVHRRILYAMHEL
GLTPDRPYRKCARVVGDVLGKYHPHGDQAVYDAMVRLIQDFSSRYPLLGGHGNFGSVDND
PPAAMRYTETRLAEIGNEALLDEIAESTVEFIGNFDNSQQEPTVLPAQLPILLLNGCSGI
AVGMATNIPPHNLGEIVDGAIALIDRPTLSDDKLFELIPGPDFPTGGEIVETDGIRSAYT
TGRGIIPVRGVTQIEEIQGGRGRHRRTAIVVTELPFQVNKAGWIEKVADLVNQSKLDGIS
DIRDESDREGIRVVIELKREADPHTVLYHLYHQTPLQNNFGVILLALVNGQPKQLPLREV
LQEFLNFREQTLTRRYTHELEETENRLHLLEGLLAALNHLDEAIAILRNSPDGSTAKITF
QEQLNLSAAQADAILAMPMRRITALERQKIEEEQAQLEAKRKELKRLLGDRHELLKELKK
HLRALKRKYADPRRTRIISEREAAAATAKAKPRQSGKTRETSGGKGKADAGKTRKSSRSR
ATPATAELERPPEEAIVGFTQRGYVRRLSPGAIEPKENHRRKTATVEELAANEDFYIHSE
LTKTDRDILVFLTTGKAYSVKVGDIPPTTGRNAKGTPLITLLPPSAQGDPEAIAAHLLRS
DEPTSTNLILLTQRGRIKRLSLSEFENLSARGLTACKLKNGDALERVVLARRHEQLAIAT
SGGRLLRLAIDDEHLPISTRTSQPQSALRLGKGEHLVGCVALRDRDHLILVSRQGYAKQL
PLNLIRLAKPGDLGMQSMPFRSREDALAGIFSPPPDSDLIVLTDSDRLLSVPVRSIPVKG
KDDPGDRLSKFKAKEEIVSLLSSASTI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacagttaaacctactgtcctccggacaggtcatcccgactgccttgcacgcg
gaaatgcaacagtcttacctcgaatatgccatgagtgtgattgttgggagggccttgcct
gacgtccgcgatggcttaaaacccgttcaccgccgcatcttgtacgcgatgcacgaattg
ggtttgacccccgatcgcccctatcgcaaatgcgcccgcgtcgtcggcgacgtactcggt
aaataccacccccacggcgatcaagccgtttacgacgccatggtgcgcttgattcaagac
ttttccagtcgctacccgcttttggggggtcacggaaatttcggctcggtggataacgac
ccacctgcggccatgcgctacaccgaaacccgtctcgccgaaattggcaatgaagcctta
ctcgacgagattgcagagtctacggtcgagtttatcgggaacttcgacaactcccaacaa
gaaccgaccgttttacccgcccaattgcccattttactgctcaatggctgttcggggatt
gccgtgggcatggcgacgaacattccgccccacaatttgggcgaaattgtcgatggggcg
atcgccttgatcgatcgcccgaccctttccgacgacaaactcttcgagttgattcccggc
ccggactttcccacgggaggcgaaatcgtcgaaactgacggcattcgcagcgcctacacc
accggacgcggcatcatccccgtgcgcggcgtcacccaaattgaggaaatccagggggga
cgaggacgccaccgccgcacggcgatcgtcgtgaccgagttaccctttcaagttaacaaa
gcgggctggattgaaaaggtcgccgatttagtcaaccaaagtaaactcgacgggatctcc
gacatccgcgacgagagcgatcgcgaaggcattcgcgtcgtgatcgaactgaaacgagaa
gccgatccccacacggttctctatcacctctaccaccaaacgcccttacaaaataacttc
ggggtgattctcctcgccctcgtcaacggtcagccgaaacaactgcccctacgcgaggtt
ttacaggaatttctcaattttcgagaacaaaccctcacccgccgctacacccacgaactc
gaagaaacggaaaatcgcctacacttgctcgaaggcttgctcgcggcgttaaaccacctc
gacgaagcgatcgcgatcttacgcaacagtcccgatggcagcacggcgaaaattaccttt
caagagcaactcaacttgagtgcggctcaagcagatgcgatcctggcgatgccaatgcgc
cggattaccgccctagaacggcagaaaattgaggaagaacaagcccaactcgaagccaaa
cgcaaagaattaaagcgtttgctcggcgatcgccacgaactgcttaaagaacttaaaaaa
cacctgcgcgccctcaaacgcaagtacgccgacccgcgacggacgcgaattatttcggaa
cgggaagcggcggcggcgacggcgaaagccaaaccgcgccaatcgggtaaaacccgcgaa
acttcgggcggaaaaggaaaagcggatgcgggcaaaacccgtaaatcgtctcgttcccgt
gcgactcccgcaacggcagaattagaacggcctccagaagaggcgatcgtcgggtttacc
caacgcggctacgtccggcgattgtcccccggcgcgatcgagccgaaggaaaaccaccgc
cggaaaacggcaacggtggaagaactcgccgccaatgaagatttttatatccacagcgag
ttaacgaaaaccgatcgcgatattttggtgtttttaacgaccggaaaagcttattcggtg
aaagtcggcgatattccaccgaccacgggacgcaatgcgaaaggaacgccattgattacg
ttgttgcccccgtcggcgcaaggggatcccgaggcgatcgccgcccacttgcttcgctcg
gacgaaccgacaagcaccaatttgatcctcttaacccagcgcggtcggatcaaacgcctg
tcgctatcggagttcgagaacctcagcgcgcgcgggctgacggcgtgcaaactcaaaaat
ggagatgctctggaacgggtcgttctcgcccgtcgtcacgagcaactggcgatcgcgacc
tccggcggtcggttgctgcgcttggcgatcgacgacgagcatttaccgatttcaacgcgc
acctcccaaccccaatctgccttgcgcttgggtaagggagaacacctcgtcggctgcgtg
gccctgcgcgatcgcgaccatctgatcctcgtttcccgccaaggttacgccaaacaactg
cccctcaatttaattcgactcgccaaacccggggatttgggaatgcaatcgatgccattt
agatcgcgagaagacgctttggcgggtattttttccccgccgccggacagcgatttgatc
gtgttgaccgatagcgatcgcctcttgtccgttccggtgcgatcgatccccgtcaaaggc
aaagacgatcccggcgatcgcctctccaaatttaaagcgaaagaagaaatcgtctcttta
ctcagttccgccagtacgatttaa
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