Oxynema aestuarii: HCG48_05185
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Entry
HCG48_05185 CDS
T06528
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oxy03400
]
HCG48_05185 (radA)
DNA repair and recombination proteins [BR:
oxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCG48_05185 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
nSTAND_NTPase5
DUF7125
AAA_22
Lon_C
nSTAND3
NTPase_1
ABC_tran
ATPase_2
GvpD_P-loop
AAA_14
NACHT
Rad51
RecA_N
AAA_5
AAA
NPHP3_N
KTI12
ArsA_ATPase
SLFN-g3_helicase
MCM
PAXNEB
zf_UBZ
NB-ARC
zf-C2H2_6
Motif
Other DBs
NCBI-ProteinID:
QIZ70036
UniProt:
A0A6H1TUZ7
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Position
complement(1309738..1311516)
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AA seq
592 aa
AA seq
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MPKQRIQYTCDECGAEFPQWYGKCPSCNIYGTLVEQVVNSGSSAGTRPSLNPDMSWMRTG
PRPQPSSSGQPRSAFRLSQIADQMVTRWPSGYSELDRVLGGGIVPGSLVLIGGEPGIGKS
TLLLQVANRLSRSRYKILYVSAEESGQQVKLRAQRLGIQPEDPLELDTDDPLELPPASSN
ELQDILRSEGDELEASVAADSEVEQVQEESSLEIASESPPSDDGEDRRGEGNGHSNFYLL
PETDLEEILRELESLKPNLAIIDSIQTIYFPSLTSAPGSVAQVRECTSALMQVAKRENIT
LLIVGHVTKEGGIAGPRVLEHLVDTVLFFEGDRFASHRLLRSMKNRFGATHEIGVFEMVA
QGLEEVTNPSELFLGNREEFVSGSSTIVACEGTRPIVVELQALVSPASFGSPRRATTGVD
SNRLVQILAVLEKRVGVPLSKLDTYVSSVGGLSVSEPAADLGVAIAVVASFRDRVVDPHT
ILLGEVGLGGQVRPISQLELRLREAAKLGFKRAIIPKGQIPPDLGMEIIPVAKVLDAIIE
AIPAPLNPSELTSLAPATDELSPIVETPLDDNFEDDFEDDFNDELDDDDPVF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcagcgaattcagtacacttgcgacgaatgcggtgccgaatttccccaatgg
tacgggaaatgcccctcttgtaacatttacggaaccctcgtagagcaagtggtcaattcc
gggagtagtgcggggacgcgaccgagtttgaacccggatatgtcttggatgcgaaccgga
ccgcgccctcaaccctcgtcgtccggtcaaccgcgctccgcatttaggttatctcagatc
gccgaccaaatggtgacgcgctggccctcgggttatagcgaactcgatcgcgtcctcggc
ggcgggatcgtacccggttctctggtattgattggcggcgaaccggggatcggtaaatcg
accttattgcttcaagttgccaatcgcctatcgcgatcgcgctataaaattttgtacgtg
tctgcggaagaatccggtcagcaggttaaattacgcgcccaacgcttgggaattcaaccg
gaagatcccctcgaactcgacaccgacgaccccctcgaattgccccccgcgtcgtcgaac
gagttgcaagacatcctccgttccgagggagacgagttggaagcaagtgtcgccgcagac
tcggaggtggagcaggtgcaggaggaatcgagcctcgaaatcgcgtccgagtctcccccg
tcggacgacggtgaggatcgccggggagaggggaacggtcactcgaatttttatctgctc
ccggaaacggatttagaggaaattttaagagaactggaatctttaaaacccaatctcgcc
attatcgatagtattcaaacgatttactttccctctctaacctccgctcccggttccgtc
gcccaagttcgcgaatgtacttcggcgttgatgcaagtggcgaaacgggaaaatattacg
ttattgattgtcggtcacgtcaccaaagaaggcggaatcgccggaccgcgcgttttggaa
cacttggtcgatacggttttattttttgaaggcgatcgctttgcgagtcatcgtctgttg
cgatcgatgaaaaaccgttttggcgccacccacgaaatcggggtgtttgaaatggtcgcg
caagggttggaagaagtgaccaatccttccgaattatttttggggaatcgcgaggaattc
gtgtccgggagttcgacgattgtcgcttgtgaaggaacgcgaccgattgtcgtcgaattg
caggcgctggtgagtccggcgagtttcggatcgccgcgacgcgccaccactggggtcgat
agtaatcgcctggttcagattctggcggtgttggagaaacgagtcggcgttcccctctcg
aaattagatacttatgtcagttccgtgggggggttgagtgtttccgaacctgcggcggat
ttgggggtggcgatcgccgtggttgcgtcgttccgcgatcgtgtcgtcgatcctcacact
atcttactcggcgaagtcggcttgggcggtcaagtccgtccgatctcccaactcgaactg
agattgcgcgaagccgctaaactaggatttaaacgcgccatcattcctaaaggtcaaatc
cctcccgacctcggaatggaaattatccccgtggctaaagttctcgatgccattattgaa
gcgatcccagctcctttgaatccttcggagttgacgagcttagcacccgcaacggacgaa
ctttctccaatcgtcgaaacgccattagatgataattttgaagatgattttgaagatgat
tttaatgacgaactagacgatgacgatccggtattctaa
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