Oxynema aestuarii: HCG48_08600
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Entry
HCG48_08600 CDS
T06528
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oxy03016
]
HCG48_08600 (truB)
Enzymes [BR:
oxy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HCG48_08600 (truB)
Transfer RNA biogenesis [BR:
oxy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HCG48_08600 (truB)
Prokaryotic type
HCG48_08600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QIZ70631
UniProt:
A0A6H1TVN9
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All DBs
Position
2132052..2132951
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AA seq
299 aa
AA seq
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MQGFVNLNKPTGMTSHDCVARVRRLLRTKRVGHGGTLDPAATGVLPIAVGKATRLLPYLP
TGKAYRGTVRFGVTTATDDLEGTVISQNPVPTLTRDAVEAVLGRFVGAIEQIPPAYSAIQ
VNGKRLYQLARAGEAVEVPARQVEIYRIALSEWRGGDYPEAVLDIECGPGTYIRAIARDL
GEILATGGTLAALTRTQSCGFALADSVTFEEMETACDRGTFTPIAPDKALAHLSKVSLSP
EFARRWCQGQRVPLPPASGNCPPPVCVDRDDGEFLGIAEITESEGDRRLVPKMVFLPEG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggattcgtcaatttaaacaagcctactggcatgacctctcacgattgtgtcgcc
cgggttcggcgcctgttgcgaaccaagcgcgtcggacatggcggcaccttagaccctgcc
gccacgggagttttaccgatcgccgtcggtaaagccacccgcttgttgccgtacctcccc
acggggaaagcctatcgcggcaccgtgcgctttggggtgaccaccgccaccgacgacctc
gaaggaacagtcatcagccaaaacccggttccgaccctaacccgagacgcggtagaggcg
gtgttgggtcgcttcgtcggggcgatcgaacaaatccccccggcttatagtgcgatacaa
gtcaacggcaagcgcctttatcaactcgcccgcgccggggaagcggtggaagttccggcg
cggcaagtcgagatttaccggatcgcgctgtccgagtggcgcggcggcgactatcccgaa
gccgtcctcgatatcgagtgcggcccgggaacctacatccgggcgatcgcccgcgattta
ggggagatcttggcaaccgggggaaccctggccgctctcacgcgcacccaaagttgcggt
tttgccctcgcggatagcgtcaccttcgaggagatggaaaccgcgtgcgatcgtggcaca
tttaccccgatcgccccggacaaagccctcgctcacttatctaaagtgtccctttccccc
gaattcgcccgccgttggtgccaaggtcagcgcgtccccctgccccccgcaagcggcaat
tgcccccccccggtatgtgtcgatcgcgacgatggagaatttcttggaattgcggaaatt
actgagtctgaaggcgatcgccgtctcgtccccaaaatggtctttttacccgagggttaa
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