Oxynema aestuarii: HCG48_12015
Help
Entry
HCG48_12015 CDS
T06528
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HCG48_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
HHH_9
Tex_central_region
S1
S1_RRP5
YqgF
HHH_7
OB_RRP5_4th
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QIZ71214
UniProt:
A0A6H1TXA1
LinkDB
All DBs
Position
2942816..2944975
Genome browser
AA seq
719 aa
AA seq
DB search
MLDLARIIADELAVKPTQVENALTLFAEGATIPFVARYRKERTGSLDETQLRHISERYDY
LTELEDRKKVILETIAQAGKLTEELQAKIEACQQKNELEDLYLPYKPKRRTRATIARERG
LEPLADWIKQLNLSKASAALTPEAARYLDPEKGVETVEDALKGAADILAEEIAERTESRA
YLRDYFLKQGVFASRIKDDYPEGTTKYEMYRQFSVPVREIAPHNLLALFRGEKEGIINLT
LDFDETEVLNYLESREIRTKVPEIRNFYRELIQDGFKRLMQNSLTSEVRSLKKEWADIES
IETFEANLRELLLSAPAGMKPTLAIDPGFRTGCKVSVLDETGQFLEYQTIFPHTGDRQKV
EAAKTISRLIAQYKIESIAIGNGTAGRETDRFIGDVLKTCDNPPIKVMVNESGASIYSAS
EVARDEFPDLDLTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDDT
VESCVNYVGVDLNTASKELLGFVSGLTPTIAKNIIAYRNENGAFKRRKQLLKVAKLGPKT
FEQAAGFLRIRGGDNPLDNTAVHPESYAVVEAIAGDLGIPLTEIAKAGDRLKSVQLQKYT
SDRVGLPTLRDILKELEKPGRDPRAEFKYATFKEGINEISDLRPGMELEGIVTNVTNFGA
FVDIGVHQDGLVHISQLADRFVNDPKEIVKVGQVVKVRVLDVNEQLKRIGLSMRSRDRA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatctcgcccgtattattgccgacgaactcgccgtcaaacccactcaagtcgaa
aacgctttaaccctattcgccgaaggggccaccattccctttgtcgcccgttatcgtaaa
gaacggactggatccttagacgaaacacaactgcgccacattagcgaacgttacgactat
ctcaccgaactcgaagaccgcaaaaaagtcatcttagagacgatcgcccaagcgggaaaa
ctcaccgaagaactgcaagccaaaatcgaagcctgtcagcaaaaaaacgaactcgaagac
ctctaccttccctacaaacccaagcgccggactcgcgccacgatcgcccgcgaacgcggt
ttagaacccctcgccgactggattaaacaactcaatctcagtaaagccagcgccgcttta
acccccgaagccgcccgctatctcgatccggaaaaaggcgtcgaaaccgtcgaagacgcc
ttaaaaggagccgccgatattttagccgaagaaatcgccgaacgcaccgaatcgcgcgcc
tacctccgggattattttttaaaacaaggcgtcttcgcgtcgcggattaaagacgactat
cccgaaggaacgacaaaatatgaaatgtatcgccagttttcggttcccgttcgcgagatt
gcccctcataatttactggccttattccgaggggaaaaagaagggattattaatttaacc
ctggacttcgacgaaactgaagttttaaattatttagaatcgcgagaaattcgcacgaaa
gttcccgaaattcgcaacttctatcgcgaattgattcaagatgggttcaagcgtttgatg
caaaattccctcacctccgaggtgcgatcgctcaaaaaagaatgggccgatatcgaatcg
atcgaaacctttgaagcgaacttacgcgaactgctgctgtccgcccctgcgggaatgaaa
ccgaccctggcgatcgatccggggtttagaaccgggtgcaaagtctccgttttggacgaa
accgggcagttcctcgaatatcagacaatttttccccatacgggcgatcgccaaaaagtt
gaagccgcgaaaacgatttcccgtttaattgcccaatataaaatcgagtcgatcgcgatc
gggaacggtaccgccggacgggaaaccgaccgttttatcggcgacgttctcaaaacttgc
gacaatccaccgattaaagtgatggtcaacgaatccggcgcgtcgatttattccgccagc
gaggtcgcccgcgacgaattccccgatttagacctcaccgttcgcggggcgattagcatc
ggtcgccgcttgcaagacccccttgcggaattggtgaaaatcgacccgaaatcgatcggc
gtcggacaatatcagcacgacgtagaccaaaagttactcaagaaaaagttagacgacacc
gtagaaagttgcgtcaactatgtcggggtggatttgaatacggcatcgaaggaattactc
gggttcgtgtccggtttgacgccgacgatcgccaaaaatattatcgcctatcgcaatgaa
aatggagcgtttaaacggcgcaagcagttattaaaagtggcgaaactcggtccgaaaacc
ttcgagcaagcggcggggtttttgcgaattcgcggtggggacaatccgttagataatacg
gcagttcacccggaaagttatgcggtggtcgaggcgatcgcgggagatttaggcatccct
ttaactgaaattgccaaagcgggcgatcgcctcaaatccgtgcagttgcaaaaatacacg
agcgatcgggtcggcttacctaccttgcgcgacattctcaaagaattagaaaaacccgga
cgcgacccccgcgccgagttcaaatatgccacctttaaagaaggcattaacgagatttcc
gacctgcgtccggggatggaactcgaaggaattgttacgaacgtgaccaatttcggcgcc
tttgtcgatatcggcgttcatcaagatgggttagtccatatttcccaactggcggaccgt
tttgtcaacgatccgaaggagattgtcaaggtcggacaagtggtcaaggtgcgggtgttg
gatgtcaacgaacagttaaagcggattggtttgtcgatgcgatcgcgcgatcgcgcctaa
DBGET
integrated database retrieval system
