Oxynema aestuarii: HCG48_12180
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Entry
HCG48_12180 CDS
T06528
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
oxy
Oxynema aestuarii
Pathway
oxy03030
DNA replication
oxy03430
Mismatch repair
oxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCG48_12180
03430 Mismatch repair
HCG48_12180
03440 Homologous recombination
HCG48_12180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oxy03032
]
HCG48_12180
03400 DNA repair and recombination proteins [BR:
oxy03400
]
HCG48_12180
Enzymes [BR:
oxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCG48_12180
DNA replication proteins [BR:
oxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCG48_12180
DNA repair and recombination proteins [BR:
oxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCG48_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
DnaA_N-like_STI
AAA_30
AAA_19
RuvB_N
TIP49
RCF1-5-like_lid
AAA_5
AAA_16
AAA_18
DNA_pol3_delta_C
AAA_11
AAA_14
Rad17
AAA_28
DUF815
Motif
Other DBs
NCBI-ProteinID:
QIZ71246
UniProt:
A0A6H1TYF9
LinkDB
All DBs
Position
2988894..2990918
Genome browser
AA seq
674 aa
AA seq
DB search
MSYEPLHHKYRPQTFADLVGQEAIAATLTHAIRQQKIAPAYLFAGPRGTGKTSSARILAK
SLNCLNSDRPTDRPCGTCEACRTIARGTALDTIEIDAASNTGVDNIRDLIERAQFAPVQC
RHKVYIIDECHMLSTAAFNSLLKTLEEPPEHVVFVLATTDPQRVLPTIISRCQRFDFRRI
PVEATVAHLQQIARQENILIDEDALVTVAQLSQGGLRDAESLLDQLSLSDEQVSVERVWN
LVGAVPERDLLQLLEAIAADDGRAVLDRVRELMERGREPLVVLQNLARFYRDLLVAKTAP
DRQDLVAMTADTWQRLCEFAARHTEVGVILAGQQHLAKSEAQIKNTTQPRLWLEVALLGL
LPSATVQGRPFAIAPNVAPAAPPASPAPVARPPEEAPPSARSSPPPPPPPPPPAVRPDNG
KASPVPEAPAASAEAHVVDRNLDEFWHSILDRIDNPSLQALLRQHSQLLEFEGNIARVGI
ASPPLQQIVNTKLDLLESFCAKILDRRVKVKLEVCKINKSKEQKARGSAPAPPSPAAREP
NPSSASPVTPAPPMETPRSPSRYPTQTPATERRNPRPTATPAATSSASAIAHNGFEDEVT
VAAKRLAEFFQGELVNLDEDWEIESVGEGRSPLVAEDEDVPEGASPPVAEEDPVPKPGIP
DPELDDNPFGEYDF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgaaccgctccatcataagtatcgcccccagacctttgccgatctggtcggt
caggaggcgatcgccgccaccttaactcatgccatccgccaacaaaaaatcgcccccgct
tacttatttgccggaccgaggggaaccggaaagacatcgagcgcccgtattctagccaaa
tctctcaactgcctcaattccgaccgaccgaccgatcgcccctgcgggacctgcgaagcg
tgccggacgatcgctcgcggtacggccctcgacacgatcgaaatcgacgcggcgagcaat
accggagtcgataacattcgcgacctgatcgaacgggctcagttcgccccggtgcaatgt
cgccacaaagtctacatcatcgatgaatgccacatgctgagtacggcagcattcaattcc
ctgttaaaaaccctcgaagaaccgccggaacacgtcgttttcgtcctcgccaccacggac
ccccaacgagttttaccgacaattatctcgcgctgtcagcgtttcgacttccgacgcatc
cccgtcgaagcgacggtcgcccacttgcagcagattgcccgccaggaaaacatcctcatc
gacgaggacgccttggttaccgtcgcccaactctctcaagggggactgcgcgatgcggaa
agcttactcgaccaactctccctcagcgacgaacaggtgagtgtcgaacgggtctggaat
ttagtcggcgccgttcccgaacgcgacttgctgcaattgttagaggcgatcgccgccgac
gacggacgcgccgtactcgacagggtgcgcgaactgatggagcgcgggcgcgaacccctg
gtggttctccaaaatttggcccgtttttatcgcgatttgctcgttgccaaaacagccccc
gaccgtcaagatctagtcgccatgaccgccgatacctggcagcgcctgtgcgagtttgcc
gcccgccatacggaggtcggcgtcattttggcgggacagcaacatttagccaaaagcgaa
gcgcaaattaaaaacacgacccaaccgcgcctctggctggaagttgccttactggggttg
ttaccgtcggcgacggtccaagggcgccccttcgcgatcgccccgaacgtagcccccgcc
gcccctcccgccagtccggccccggtggcccgtccccccgaggaagcccccccctcggcg
cgatcgtccccgccgccaccgccgccacctccaccgcccgccgtcagacccgacaacggt
aaagcgtccccggtacccgaagcccctgcagcgtcggcggaagcgcatgtggtcgatcgc
aatttggatgagttttggcactcgatcctcgatcgcatcgataatccttccctgcaagcg
ctcttgcgccaacattcccaactgttggaattcgagggcaatatcgcccgggtcgggatt
gcatctcccccgttgcagcaaatcgtcaataccaaactcgatttactcgaatcgttctgt
gcgaagatcctcgatcgacgggtcaaggtgaagttagaagtttgtaaaattaacaaatcg
aaagagcagaaggctcgcggttccgcgcccgcgcccccctctcccgccgcccgcgagccg
aacccgtcgagtgcgtctcccgtcacccctgcaccgccgatggagacgccgcgatcgccc
tctcgataccctacgcaaacccccgctaccgaacgtcgcaacccccgtcccacggcgacc
ccggcggcgacatcttcggcgagtgcgatcgcccacaacggctttgaggatgaagtgacc
gtagcggcgaaacggttggcggagttctttcagggagaattagtcaatctcgatgaggat
tgggagatcgagagcgttggggaggggcgatcgcccctcgtcgccgaggatgaggacgtt
cccgagggagcatcccccccggtcgcggaggaggatccggttccgaaacctggaattccg
gatccggaactcgatgacaacccatttggggaatacgatttttaa
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