Oxynema aestuarii: HCG48_14065
Help
Entry
HCG48_14065 CDS
T06528
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
oxy
Oxynema aestuarii
Pathway
oxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCG48_14065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oxy03019
]
HCG48_14065
03016 Transfer RNA biogenesis [BR:
oxy03016
]
HCG48_14065
Enzymes [BR:
oxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HCG48_14065
Messenger RNA biogenesis [BR:
oxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HCG48_14065
Transfer RNA biogenesis [BR:
oxy03016
]
Prokaryotic type
tRNA degradation factors
HCG48_14065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
DUF3801
KhpA-B_KH
DUF4239
Motif
Other DBs
NCBI-ProteinID:
QIZ71571
UniProt:
A0A6H1TYA8
LinkDB
All DBs
Position
complement(3456015..3458168)
Genome browser
AA seq
717 aa
AA seq
DB search
MNEIEKSISFDGRDIRLSIGLYAPQAGGAVLIQSGDTSVLVTATRSKGREGIDFLPLLVD
YEERLYAAGKIPGGFLRREGRPPEKVTLTSRLIDRPLRPLFPQWIRDDIQIVATTLSMDE
QVPPDVLAVTGASMAVLLAQIPFKGPMAAVRVGLVGDDFIINPTYKEVGSGDLDLVVAGS
PDGVIMVEAGANQLPEQDIIEAIDFGLEAATDLIKAQREILEELGIEPGVEEAPVTDETL
EVFVRDRATDPIKKVLSQFDLDKTSRDKLLDEIQESIKEEILALDEQATERVAIEENSKA
LANIFKDVTKKLMRKQIVEDDIRVDGRKLDQVRPVTCRVGVLPKRVHGSGLFNRGLTQVL
SLVTLGTPGDAQDLADDLHPEDQKNYLHHYNFPPFSVGETRPMRSPGRREIGHGALAERA
LIPVLPKQEDFPYVIRVVSEVLSSNGSTSMGSVCGSTLGLMDAGVPILKPVSGAAMGLIK
EGDEVRVLTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSIETVAQAIQQAKPAR
LHILEKMLEAIDAPRSEQSPYAPRLLTLKIDPDLIGMVIGPGGKTIKGITEETGAKIDIE
DDGTVTVSAVEAEKAQRALEIIRNMTRKLSAGDVYSGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDELAVGDRVVVKIRDIDNKGRINLTRLNIHPDEAAAARAAAGST
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagattgaaaagtcaatatcctttgacggacgggatattcgactcagtataggc
ttatatgcacctcaagcagggggtgcggtcttgattcagtcgggagatacctcggttttg
gtcaccgccacgcgatcgaagggacgagaagggattgatttcctgccgttgttagtcgat
tacgaagaaagactctatgctgcagggaaaatccccggcggtttcctgcgacgggaagga
cgcccgccggaaaaagtcaccctcaccagtcgtctaatcgatcgcccgttacgaccgttg
tttccccaatggattcgcgacgacattcaaattgtcgccaccaccctgtccatggacgag
caagtcccccccgacgtcctcgcggttaccggggcctcgatggcggtgctgctcgcacaa
atcccctttaaaggcccgatggcggcggtgcgggtcggcttggtcggcgacgactttatc
atcaatcccacctacaaggaagtcggtagcggcgatttagacctggtggtggcggggagt
cccgacggcgtgatcatggtagaagccggggcgaaccaactgccggaacaagatatcatc
gaggcgatcgatttcggcttggaagcggcgacggacttaattaaagcacagcgcgagatc
ttagaggaattggggatcgaaccgggggtggaagaagcgcccgtcaccgacgaaactctc
gaagttttcgtgcgcgatcgcgcgacggacccgattaaaaaggtgctgtctcaattcgac
ctcgataaaacctcgcgagacaagctcttagacgaaatccaagagtcgattaaagaagaa
attctcgccctcgacgaacaagcaaccgaacgggtggcgatcgaagaaaacagcaaagcc
ttggcgaacatctttaaagatgtcaccaaaaaattgatgcgcaagcaaatcgtcgaagac
gacatccgcgtagacggtcgcaaactcgaccaagtccgtccggtgacttgtcgggtcggc
gttttaccgaaacgagttcacggaagtggcttgttcaaccggggtctgactcaggtacta
tccctagtcactttgggaacgccgggagatgctcaagacctcgccgacgacttgcacccc
gaagatcagaagaattacctgcatcattacaacttcccgccgttctccgtcggcgaaacc
cgaccgatgcgatcgccgggacgccgcgaaatcggtcacggagccctcgcggaacgggcg
ttaattcccgtactgccgaaacaagaagatttcccctacgtgattcgcgtggtttcggaa
gtgctttcgtccaacggttcgacctcgatgggttcggtgtgcggttcgaccttgggtctg
atggatgccggagttccgattctcaaacccgtgtccggcgcggcgatggggttgattaag
gaaggggacgaagtgcgcgtcctcacggacattcaagggatcgaagatttcctcggcgac
atggatttcaaagtcgcgggcaccgataccggaattacggccctccagatggatatgaag
atttccggattgtccatcgaaaccgtcgcccaagcgattcagcaagcgaaacccgcacgg
ctgcacattctcgaaaagatgctcgaagcgatcgacgcgccgcgcagcgagcagtctcct
tacgcgccgcgcctgttgaccctcaagatcgatccggatttaatcgggatggtgatcgga
ccgggtggcaaaacgatcaaggggattacggaagaaaccggggcgaagatcgatatcgaa
gacgacggaaccgttacggtatcggcggtcgaagcggaaaaagcccaacgcgctctcgaa
attattcgcaacatgactcgcaagctttcggcgggggacgtttattccggtcgcgtcacg
cggattattccgattggggcgttcgtcgagtttctcccggggaaagaagggatgatccac
atttcgcaattggcggattaccgcgtcggtaaggtggaagacgagctagccgtcggcgat
cgcgtggtggttaaaatccgcgatatcgacaataaaggtcggattaatttgacgcgcttg
aacattcatcccgacgaagcggcagccgcccgcgctgcagccggatcgacctga
DBGET
integrated database retrieval system
