Oxynema aestuarii: HCG48_15555
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Entry
HCG48_15555 CDS
T06528
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
oxy
Oxynema aestuarii
Pathway
oxy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCG48_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oxy03400
]
HCG48_15555
Enzymes [BR:
oxy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HCG48_15555
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HCG48_15555
DNA repair and recombination proteins [BR:
oxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HCG48_15555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF2249
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QIZ71821
UniProt:
A0A6H1TZ15
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All DBs
Position
3843852..3844715
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AA seq
287 aa
AA seq
DB search
MPELPEVETVRRGLETATLGALIVGGEVHLERTIAHPVSVGAFLAGLSHCAIAAWQRRGK
YLLARLEARDRPSGEKDGGWLGVHLRMTGQLLWLSPDEPLQKHTRVRLFLDGDRELRFVD
TRSFGQMWWVPPQTPVEAIVSGLAQLGPEPLSADFSPDYLYEQLRRRHRPIKTALLDQGI
LAGLGNIYADESLFLAGILPMTPCNALDRSQTQRLYESIVKVLQTAIAEGGTSFSTFLNL
HGVNGNYTGVAWVYKRTGEPCRLCATAIERVKLAGRSTHFCPQCQGL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaattacctgaagttgaaactgtgcgccgaggtctcgaaacagcgactctcggc
gctttaattgtgggtggggaggtacacttagaacgcacgatcgcccaccccgtttcggtt
ggagcttttttagccggactctcccactgcgcgatcgccgcatggcagcgccgggggaag
tatttactcgctcgtctggaagcgcgcgatcgcccttccggcgagaaggatgggggatgg
ctcggggttcacttacggatgaccggacaattgctgtggctctctcctgacgaaccccta
caaaaacatacccgggtgcgcttgttcttggatggcgatcgcgagttgcgctttgtggat
acgcgcagcttcggtcaaatgtggtgggttccgccgcaaactccggtggaggcgatcgtt
agcggactcgctcaactcggtcccgaaccgctctcggcggacttttccccggattatctc
tacgaacaactccgccgccgccaccgtccgatcaaaacggcgttactggatcaggggatc
ttggcgggattggggaatatttatgcagatgaatcgctctttttagcgggaatcttgccg
atgacgccctgtaacgccctcgatcgctctcaaacgcagcgtctctacgagagcatcgtt
aaagttttgcaaacggcgatcgccgaaggcgggacgagtttcagcacctttctcaacctg
cacggggtcaacggcaactatacgggggtggcttgggtttacaagcgcaccggagaacct
tgccgtctgtgcgctacggcgatcgagcgggttaaattggcggggcgatcgacccatttt
tgtccccaatgtcagggactttga
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