Oxynema aestuarii: HCG48_16145
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Entry
HCG48_16145 CDS
T06528
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
oxy
Oxynema aestuarii
Pathway
oxy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HCG48_16145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oxy02000
]
HCG48_16145
Transporters [BR:
oxy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HCG48_16145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QIZ71918
UniProt:
A0A6H1TZ77
LinkDB
All DBs
Position
complement(3979479..3980666)
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AA seq
395 aa
AA seq
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MNRRSFLLAATSLLLHQLLVACGGQTQATLKVRLLKSSIPAQLLDAFEKQTSRDLNLDFS
AIAQLEEIYSQLRQWHQPVPPNRKKGLNLPFFGDRSPKTNIPDLVTLGDYWLSQAIREGL
IRPLDASDLQGWSALPPQWQQLVKRNDRGELDPNGSIWAVPYRWGTTAIAYRADKFKTLG
WTPTDWSDLWNPQLRDRLSLLDQPREIIGLTLKKLGHSYNTQSLKTVASLRDELQTLHAA
VKFYSSDTYLQPLILGDTWIAVGWSTDIVPLTKRNRQIKAIIPASGTALWADLWVRPADS
APVEASNALALPPQVKQWLEFCWQPEIARKLSILSDAASPRLSTPEMFDPVLLENGDRTV
QLPSPELFQKSEFLTPLPSQSLQEYLNLWQEIRRS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgacgatcttttcttctggctgcgaccagtctcctactccatcaactactcgtc
gcttgtggcggtcaaacccaagcgaccctcaaagtgcggttgctcaaatcttcaattccc
gcgcaactgctcgatgcttttgaaaaacaaacatcccgcgacctcaacctagactttagc
gcgatcgcccaacttgaagaaatctattctcaattgcgtcagtggcaccaacctgtcccc
cctaaccgcaaaaaaggcttaaatctgccctttttcggcgatcgctcgccaaaaaccaac
atccccgacctcgtcaccttgggggactattggttgagtcaagccattcgagaaggcttg
attcgacccctcgacgccagtgacctgcaaggatggtccgcactcccgccgcaatggcaa
caacttgtcaaacgcaacgatcgcggcgaactcgatcccaacggatccatttgggccgtt
ccctaccgttggggaaccaccgcgatcgcctatcgggccgataaatttaaaaccctcggt
tggacccccacggactggtccgacctgtggaatccccaattacgcgatcgcctctccctc
ctcgaccaaccccgagaaattatcggtctcacccttaaaaaactcggccattcctacaat
acccaatcattaaagaccgtcgcctcccttcgcgacgaactgcaaacccttcacgctgcc
gtcaaattctacagttccgacacctacctgcaacccctcattctcggagatacctggatt
gccgtcggttggtctaccgatatcgtgcctctgacgaaacgcaaccgccaaattaaagcc
attatccccgcttccggaaccgctttgtgggcggatttgtgggtacgacccgccgattct
gccccggtcgaagcctccaatgccctcgctttaccccctcaagtcaaacaatggcttgag
ttttgttggcaacccgaaattgcccgtaaactttcgatcctcagcgatgccgcttcccct
cgcttgagcacacccgaaatgtttgacccggtgttgttagaaaatggcgatcgcaccgtc
caacttccctctcccgaactgttccaaaaaagtgaatttttaacccctctcccttctcaa
tccctccaggaatatttaaacctctggcaggagatccgcaggagttaa
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