Oxynema aestuarii: HCG48_16660
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Entry
HCG48_16660 CDS
T06528
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
oxy
Oxynema aestuarii
Pathway
oxy02010
ABC transporters
oxy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HCG48_16660
03070 Bacterial secretion system
HCG48_16660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oxy02000
]
HCG48_16660
02044 Secretion system [BR:
oxy02044
]
HCG48_16660
Transporters [BR:
oxy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HCG48_16660
Secretion system [BR:
oxy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HCG48_16660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39
AAA_22
AAA_30
AAA_16
AAA_21
AAA_18
DUF87
AAA_29
AAA_23
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QIZ73790
UniProt:
A0A6H1U6K5
LinkDB
All DBs
Position
complement(4112983..4115955)
Genome browser
AA seq
990 aa
AA seq
DB search
MMTSTVSPSEISAFLAQTPPFDRLGVDSLKALASKCQLLRYRTGQPIYERDKMPAQLVIL
YEGQARILGYDPYKQSLASLRLAQSGEVLGWTALVRGTACETVIASTETIAIVIPSHEFV
HYIGNEPGFGEAFEQRASEIEIFELLALELQRQANATANLKDLTFKLLPDARIVNIPKGR
SSKPAIDPNWLWIVSRGSVGEVEVGNRLNPDALGSKIQSDTGARLLGLPPFDLAASPTDR
AGTLTPLDAEDTATIPYAPPKPPEPEPDPNAPPPKFPFVRGRGPINAPVACFEMLAKYFA
IPFRRDPVKRVLENQIRTQGTLSLQSCGSVGAMIGLNGQMVSVPANLITRLKAPAMVRWQ
DSFAVLFAISPKQLTVAIPEKGIVRKKPEEFTEIWGAEGQVLLLQRGSTDRQENFNFWWF
LPELLKYKGILVQVFIASFFVQLFGLANPLLTQVIIDKVIGQNSLDTLDVLGVLMVGVAF
FEAALTGLRTYLFVDTTNRLDLSLGSQVIDHLLRLPLRYFDQRRVGELAGRVGELERIRQ
FLTGTALTVVLDAIFSVIYIAVMLSYSLLMTAVALATVPLFTLLIAIVSPIVQRLLRRRA
ERYADTQSYLVEVLGGIQTVKAQNIELKSRWNWYDRYARYISAGFKTVQTSTTASSISNF
LNKLSGLFLLWVGAHLVLSNPPQMTLGQLIAFRIIASNVTGSLLRFVQVWQTFQETAMSV
ERLRDILEAKPEADESDRLNIPLPDIQGRVKFEDISFSFPGSQSLQLLNVNLEFEAGSFV
GIVGLSGSGKSTLMKLLQRLYEPKGGRILIDGYDINKVELYSVRRQIGVVLQDTLLFNGT
VRDNIALTNPDATDEQIVEAAKVAVAHDFIMDLANGYNTVVGEKGSALSGGQRQRIAIAR
TVLQNPRLLILDEATSALDYNSESQVSRNLAEAFAGRTVFFITHRLTTVKNADAIVMMDR
GSVVEEGSHDELMALKGRYYALYQQQESQL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atcatgacctcaactgtttctccctctgaaatttcggcctttttagctcaaaccccccca
ttcgatcgcctcggcgtcgatagtctcaaagcgctagcctccaaatgtcaactgttgcgc
taccgtaccggacaaccgatctacgagcgggataaaatgcccgcccagctcgtcattctt
tacgaaggacaggcgcgcatcctcggctacgacccctacaaacaatccctagccagtttg
cgtttggcccaatcgggagaagtcctgggatggaccgccttagttcggggaaccgcgtgc
gagaccgtcatcgcctccaccgaaacgatcgcgatcgtcattccgagccacgaattcgtc
cactatatcggcaacgaaccggggtttggcgaagccttcgagcaacgggcctcggagatc
gaaatcttcgagctgctcgccctcgaactgcaacggcaagccaacgccaccgccaacctc
aaagacctcaccttcaaactcctcccggacgcgcgcatcgtcaacattcccaaaggacgc
agcagcaaacccgcgatcgatccgaactggctgtggatcgtcagtcgcggcagcgtcggc
gaagtcgaagtcggtaaccgcctcaatcccgacgccctcggttccaaaatccaaagcgac
acgggcgcccgcttgctgggactgccccccttcgatctcgccgccagtcccacagaccgc
gccggaaccttaacccccctcgacgccgaagacacggcaaccattccctacgcccccccc
aaaccgcccgaaccggaacccgaccccaacgcccccccgccgaaatttcccttcgtgcgc
ggacgcgggccgattaacgcccccgtcgcctgtttcgagatgctcgccaaatacttcgcc
atcccctttcgtcgggatccggtcaagcgagttctcgaaaaccaaattcgcactcaaggc
accttaagcttgcaatcgtgcggctccgtcggcgccatgatcgggctcaacggccaaatg
gtcagcgtgcccgccaacctcatcacccggctcaaagccccggcgatggtgcgctggcaa
gacagttttgccgttttatttgccatctcccccaaacaactgaccgttgccatccccgaa
aaagggatcgtccgcaaaaaaccggaagaatttaccgaaatttggggcgccgaaggccaa
gtcctgctgttgcagcgcggttcgaccgatcgccaggaaaactttaacttctggtggttc
ctccccgaactgctcaaatacaaaggcatcctcgtccaagtctttatcgcctccttcttc
gtccaactgttcggcttggccaatcccctgctcacccaggtgattatcgataaagtcatc
ggtcaaaacagtctcgacaccctcgacgtgttgggagtgttgatggtcggcgtcgccttc
tttgaagcggccctaaccggactgcgaacgtacctgtttgtcgataccaccaaccgcctc
gatttgagcttggggtcccaagtcatcgaccacctgctgcgcctgcccctgcgctacttc
gaccagcgccgggtcggcgaactcgccggacgggtcggcgaactcgaacggattcgccaa
ttcctcaccggaaccgccctcaccgtcgtcctcgacgccatcttctcggtgatttacatc
gccgtgatgctctcctacagcttgttgatgaccgccgtagcgttggcgacggtcccgtta
ttcaccttgctgatcgcgatcgtctctcccatcgtccaacgactgctgcgacggcgcgcc
gaacgctacgccgacacccagtcctacttggtcgaagtcctcggcggcattcaaacggtc
aaagcccaaaacatcgaactcaaatcccgatggaattggtacgatcgctacgcccgctac
atcagcgccggattcaaaaccgttcaaacctccaccaccgccagttcgatcagtaatttt
ctcaacaaactctccggcttgttcctcttgtgggtcggggcgcacctggtgttgagcaat
ccgccgcaaatgaccttgggtcaattgatcgccttccggattatcgcctccaacgtcacc
ggatccctgctgcgcttcgtgcaagtgtggcagaccttccaagaaactgcgatgtccgtg
gaacgactgcgcgacatcctcgaagccaagccggaagcggacgagagcgatcgcctcaac
atccccttaccggacattcaagggcgggtcaaatttgaagatatttccttcagtttcccc
ggcagccaaagcctgcaactgctcaatgtcaacttagaatttgaagccgggagtttcgtc
gggatcgtcggtttgagcggttcgggtaaaagtaccttgatgaaactgctccaacgcctg
tacgaacccaaaggcggacgcattttaatcgacggttacgatatcaataaggtcgaactc
tactcggttcgccgtcagatcggggtcgtcttgcaagataccttgctgtttaacggcacc
gtccgcgacaatatcgccctcaccaatcccgacgccaccgacgaacagatcgtcgaagcc
gccaaagtcgccgtcgcccacgatttcatcatggatttagcgaacggctacaacaccgta
gtcggggaaaaaggttcggccctgtccggggggcaacgccaacggatcgcgatcgcccgt
accgtcctccaaaatccccgcttgttgattctcgacgaagccaccagcgccctcgactac
aactcggaatcccaggtcagccgcaacctcgccgaagccttcgcgggtcgcacggtgttc
ttcatcacccaccgcctgaccacggtcaaaaatgcagatgcgatcgtgatgatggatcgc
ggttccgtggtcgaagaagggagccacgacgaactgatggcgctcaaaggtcggtattat
gctctttaccagcagcaagagtctcagttgtaa
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