Oxynema aestuarii: HCG48_17650
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Entry
HCG48_17650 CDS
T06528
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oxy03036
]
HCG48_17650 (smc)
Chromosome and associated proteins [BR:
oxy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HCG48_17650 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
AAA_23
TBCC_N
DUF4853
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QIZ72170
UniProt:
A0A6H1U1X2
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All DBs
Position
4366148..4369873
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AA seq
1241 aa
AA seq
DB search
MVHINRLELTNFKSFGGTTSIPVLPGFTVVTGPNGSGKSNILDALLFCLGISTSKGMRAE
RLPDLVNHNLARSRTTVEASVTVTFDLEGEGLPTEEDYLQEAQAIADPGPAQVQPSEEPQ
EQNGTLASPGNEAAIAESDPQAVRESDPSNEWSITRRLRVTKAGTYTSTYYINGQACTLS
ELHEQMNRMRIYPEGYNVVLQGDVTAIISMNARERRTIIDELAGVAAFDRKIAQAKDKLD
EVKEREDRCRIVEQELISQRDRLAKDRDKAQKYQALRAQVQEKELLEAVLQWHQLNQQEW
KLREQIEAGDREAAQLRDRVATASGEIQQANERLEELNARVKALGEEELLAKQSVLAQRE
AEKEQQGQRLHELQESQQQQQRDIAEAEREIGHYQQKLEQVAQERQESDAQLKSARQLSD
ELQQDLDRRRERASAIAAASEEWVQQQTALHRQIETLQKSLDPQRTEQARLGERVRSLDR
AIAEQHETLQDFGARLAEKKVNLGEVDLRHQAAIDRVQSLAGGLAAAENDLKTQQDTEKR
LLDEQREKQRRLDKLEAQTQALREASGTGASQVIVQAGLQGVCGLVAELGRVDPHYQLAL
ETAAGGRLAYLVVEDDAVAASAIQLLKQKRAGRATFLPLNKIRPPRFSPIAELRQARGFV
DYAVNLIECDRPYLQVFAYVFGNTVVFETLDAARSHMGKTRIVTLDGELLETSGAMTGGS
SSHRSSLHFGTGGDTESAEVTELKERLEQIEQILQRCGEAIAQAAEQVKGRSQELIDAKQ
QQRELQLKTEQLQGEIDSLSAQQQQVRQQLADNTQELTAARDRLQVLDGEIPSQEARLQQ
WRHELSALEESGTNSEWQGIQAQVRQLESELQDASASLRAAQSRRQDLDNQQQRLDEKRQ
ETRRRLEDLNHAQINLDSRIEQTRAKLGEIDENIAQNRRELAEIEAKLGEDKQARDRAEE
ALRQLHLARQQIEWQGQKLQESQDARREQLGALREQIAAGRAELPDPVPPVPEESKNRLV
TALQELQKEVRSLQKQLKAMEPVNMLALEEYDRTQTRLEELQSKLATLEGERTELLLRIE
NFTTLRLRAFKEAFDAVNENFQTIFADLSEGDGYLQLDDPEDPFSSGLNLVAHPKGKPVQ
RLAAMSGGEKSMTALSFIFALQRYRPSPFYAFDEVDMFLDGANVERLAKMIKQQVQRAQF
IVVSHKTPMIKAAERVIGVTQARGAHTQVVGLNLESNSAPV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggttcatattaatcgcctagaactgacaaactttaaatcttttggcggtaccacgagc
atccccgtgttaccgggatttacggtggtcaccggaccgaacggttcgggcaaatcgaat
attttagatgcgttgctcttttgtttggggatttctacctcgaaggggatgcgcgccgaa
cggttgccggatttggtcaatcataacctcgcgcgcagtcggaccaccgtcgaggcgagt
gtgacggtgactttcgatctcgaaggcgaagggttgccgaccgaagaggattacttgcaa
gaggcgcaggcgatcgccgatccgggcccggcccaagtgcagccgagtgaagaaccgcaa
gagcaaaatgggaccttagcgagtccagggaatgaggcggcgatcgccgaatcggatccg
caagcggttcgagaatcggatccgagtaatgaatggagtattacgcggcgcttgcgggtg
acgaaagcggggacgtatacttctacgtactatattaacggtcaagcttgtaccttgagt
gagctgcacgagcagatgaaccggatgcgaatttatccggaagggtacaatgtagtctta
caaggggacgtcaccgcgattatctcgatgaacgcgcgggaacggcgcacgattattgac
gagctggcgggggtggcggcgttcgatcgcaagatcgcccaagcgaaggataagttagat
gaggtgaaagagcgcgaggatcgctgtcggattgtggaacaagagttgatttcccagcgc
gatcgcctcgccaaggatcgggataaagcgcagaaatatcaagccctgcgcgcccaggtc
caagagaaagaactgctcgaagcggtgctacagtggcaccagctcaaccaacaggaatgg
aagttgcgcgagcaaatcgaagcgggcgatcgcgaagcggcccaattgcgcgatcgcgtc
gccaccgccagtggcgagattcaacaagccaacgaacgactcgaagaactcaacgcccgg
gtgaaagccctgggagaggaagaactgctggcgaaacagtccgtactcgcccaacgggaa
gcggaaaaagagcagcaagggcagcgcttgcacgaactccaagaaagccaacagcagcaa
cagcgagacattgccgaagccgagcgggaaatcggccattaccagcagaaattagagcaa
gtcgcccaagaacgccaggaaagtgacgctcaattgaaatcggcgcggcagttgagcgac
gaactgcaacaagacctcgatcgccgccgggaacgggccagcgcgatcgccgccgcctcg
gaagagtgggtgcagcaacaaaccgccttacaccgccagatcgaaaccttgcagaaaagc
ttggatccgcaacggaccgaacaggcgcgcctcggggaacgggtgcgatcgctcgatcgc
gcgatcgcggaacaacacgaaaccctgcaagacttcggcgcccgactcgccgaaaaaaag
gtgaatttgggcgaagtggacctgcgccaccaggcggcgatcgatcgcgtacaatcctta
gccggggggttggcggcggcggagaacgacttaaaaacccaacaagacacggaaaagcgg
ctgctcgacgaacaacgggagaaacagcgccgtctcgacaaactcgaagcccaaacccaa
gccctgcgcgaagccagtgggaccggggccagtcaagtaatcgtccaggcgggattgcag
ggggtgtgcggtttggtcgccgaattggggcgcgtcgatccgcattaccaattagccttg
gaaaccgccgccggaggacggttggcgtatttggtggtcgaagatgatgccgtggcggcg
tcggcgatccaactgctcaagcaaaaacgggccggacgggcgacctttttgccgttgaat
aagattcgaccgccccgattttcgccgatcgccgaactgcgacaggcgcgcggattcgtc
gattatgcggtgaatttgatcgagtgcgatcgcccctacttgcaagtgtttgcctacgtt
ttcggcaatacggtggtgttcgagaccctggatgcggcgcgatcgcacatggggaaaacc
cggatcgtcaccctcgacggcgaactgctcgaaacctccggcgccatgaccggggggagc
agttcccaccgttctagtttgcacttcgggaccgggggggatacggaatcggcggaagtg
accgagttaaaagagcggttggagcagatcgagcagattttacaacggtgtggggaggcg
atcgcccaagccgccgaacaggtcaaggggcgatcgcaggagttaatcgacgccaaacag
cagcaacgggaactccagctcaaaaccgagcagttacaaggagaaatcgatagcctgagc
gcccaacagcagcaagttcgccagcagttggccgacaatacccaagaattgaccgccgcg
cgcgatcgcctccaagtcctcgacggcgaaatccccagccaagaagcccgcttgcagcaa
tggcgccacgaactgagcgccctcgaagaatcggggacgaacagcgaatggcaggggatc
caggctcaagtgcgccaactcgaaagcgaattacaagacgcctcggcgtccttgcgcgcc
gcccaaagtcgccgccaggacctcgacaaccagcaacaacggctcgacgaaaaacgccaa
gaaacccggcgacgattggaagacctgaaccacgcccaaatcaacctcgacagtcgcatc
gaacaaacccgagccaaattaggggaaattgacgaaaacatcgcccaaaatcggcgcgaa
ctggctgaaattgaagccaaattaggggaagacaaacaagcgcgcgatcgcgccgaggaa
gccttaagacaactgcacctcgcccgccaacaaatcgaatggcaggggcaaaaactgcaa
gaaagccaggacgcccgccgggaacaactcggagccttacgggagcaaatcgccgccgga
cgcgccgaactgcccgacccggtgccccccgtccccgaagagagtaaaaatcgcctggtg
acggccctgcaagagttgcaaaaagaggtgcgatcgttgcaaaaacaactcaaagcgatg
gaacccgtcaacatgctcgccctcgaagaatacgatcgcacccaaacccgtttggaagaa
ttacaatccaaactcgccaccctcgaaggcgaacgcaccgaactgctcctgcgaattgaa
aactttactaccttaagactgcgggcttttaaagaagccttcgacgccgtcaatgaaaac
tttcaaaccatcttcgccgacctctccgaaggggacggttaccttcaactcgacgaccca
gaagatccgttttccagtggcttaaatctcgtcgcccacccgaaagggaaacccgttcaa
cgcctcgccgccatgtccggcggtgaaaaatcgatgaccgccctcagttttatttttgcc
ctccaacgctaccgtccttcaccgttctacgcttttgacgaagtcgatatgtttttggac
ggggcaaatgtagagcgattagctaaaatgattaaacaacaggtccaacgcgcccagttt
attgtggtcagccacaaaactccgatgatcaaagcagcagagcgggttattggcgttact
caagccagaggcgctcacacccaagtggtcggcttaaatctagagtcgaacagcgcgcct
gtttaa
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