KEGG   Oxynema aestuarii: HCG48_17810
Entry
HCG48_17810       CDS       T06528                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated endoribonuclease Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
oxy  Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:oxy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:oxy02048]
    HCG48_17810 (cas6)
Prokaryotic defense system [BR:oxy02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    HCG48_17810 (cas6)
   Subtype I-D factors
    HCG48_17810 (cas6)
SSDB
Motif
Pfam: CRISPR_Cas6 CRISPR_Cas6_N Sigma70_r4_2 Sigma70_r4 Cas6_I-A HTH_23 GerE
Other DBs
NCBI-ProteinID: QIZ72200
UniProt: A0A6H1U202
LinkDB
Position
4414807..4415976
AA seq 389 aa
MTSSSSPRKRRRPTRKLALHWPDETELVGVQFNLKPVSSDALFPQYAIALHAWFLAQVRS
FNPTLSARLHDDPSEKAFTVSALDGPFQAGERQLHLIPEQTYRWYVTGLSHSVTRFLHVW
LDRLPGRVEINKAPLKIDSTELFLAPTTYRELLESVSLPGRGVKLTFLSPTSFRRKGYHF
PLPVPYNLFHSYLRRWNDFSGIPVESDPFLNWVDSEVLIRRHRIESVKVPGGKRGSVTGF
TGAIDLGLAKRNEPEEFARLFYTLSALAPYCGTGHKTTFGLGQTRSGWLLEEEEQPITTP
VEERLAQRIANLTDVFMAQRQRLGKVRVEQIEKTARTRATILARRETGESLQAIARDLEL
PYETVKTYAKLARRALRESEGEEEEGGDE
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgacttctagttcttctcctcgcaaacgacgccgaccgactcgaaaattagcgctccac
tggcccgacgaaacggaattagtgggagtgcagttcaacctcaaacccgtcagttccgac
gccctgtttccgcaatacgcgatcgccctgcacgcttggtttctggcgcaagtgagatcg
tttaacccgaccctctccgcccgactgcacgacgatccctcggaaaaagcctttaccgtt
tccgccttagacggtccgtttcaagcgggagaacgacagttacacctgattcccgaacag
acctatcgctggtatgttaccgggctgtctcactccgtgactcgcttcctgcacgtttgg
ctcgatcgcctccccgggcgcgtcgaaattaacaaagccccgcttaaaatcgacagtacc
gaactatttctcgcccccaccacctatcgagaactgctcgaatcggtcagtttgcccgga
cggggcgttaaattgaccttcctttcacccaccagttttcgccgcaagggatatcacttc
cccctccccgttccttataacttgtttcattcttacctgcgtcgttggaacgatttttcc
ggcattccggtggaatccgacccctttttaaactgggtcgattccgaagtgctgattcgc
cgtcaccggatcgaatcggtgaaagtgccggggggtaagcgaggcagcgttaccggattt
accggggcgatcgatttggggttggcgaaacgcaacgagcccgaagagttcgcccgctta
ttttatactttaagtgcgctggcgccttactgtggcacgggacataaaacgaccttcggt
ttggggcagacgcgatcgggatggttgttagaagaagaggaacaaccgataacgaccccg
gtcgaagaacgactcgcccaacgaatcgccaatttgaccgacgtgtttatggcccaacgc
cagcgcttggggaaggttcgcgtggagcagatcgagaagacggcgcgcactcgggcgacg
attttagcgcgccgagaaacgggggaatcgttacaggcgatcgcgcgagatttagagtta
ccttacgaaacggtgaaaacttacgcgaagttggcgcggcgagctttgcgcgaaagtgag
ggggaggaggaagaaggcggcgatgagtga

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