Oxynema aestuarii: HCG48_18550
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Entry
HCG48_18550 CDS
T06528
Name
(GenBank) cadherin-like domain-containing protein
Organism
oxy
Oxynema aestuarii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBBP
HemolysinCabind
He_PIG
Cadherin_5
LTD
Extensin_1
Cadherin_4
Big_9
Sarcoglycan_2
Motif
Other DBs
NCBI-ProteinID:
QIZ72330
UniProt:
A0A6H1U2D7
LinkDB
All DBs
Position
complement(4603081..4609320)
Genome browser
AA seq
2079 aa
AA seq
DB search
MQNHLVPLPSDSESNSPSQTALPLSFIPNVGQTDAEVAFNLRHDGVNIFFTPDEIVFNSI
NQLESETVSSTVEMQFLGANPNPEITGLQELEGVANFFYGNDPEKWLTNVPTYGGIVYQD
LYPGIDLVYRGTAGNLKRDFIVDAGVDPNLIQIDYSGIENIEIDEEGDLILTTEYGEFIE
DAPFSYQYINGEIVEVESRYKLLDENRIGFELGAYNPAYAVAIDPVLEYSTYLGGTGDDG
GSSIAVDNAGNAYITGATLSSDFPATVGGNQAVDVFVAKLNPTGMGLLYSTYIGGSTIDA
GTDITVDNLGNAYITGSTNSIDFPTLSAFQTAKAGGNFDANEVFITKLDNTGTLAYSTYL
GGTSIDIGRGIVVDSNGDAYVTGETYSTDFNSANNTNNGAVDAFVARIKASGAVLAYSRY
VGGKHIDQGQGIAINSNEEVYITGETYSTATDFNTDFPATSTGLQVNINQGDNTSNSDAF
IVKLNTAGTNVEYGTYFGGSNTDEGYGIVVDDIGNIYIAGITGSGTTATLPLPTTAGVLQ
DTHGGGTFDVFVAKFNETGVTPVFSLDYSTYLGGMGNDNVRGPKSLAVDDSGNAYLTGYT
RSNDFPLLPPTLTNSPIQQVFGGGDDGFVAQLNNDATALTYSTYLGGTSEDRAYGIALDS
SGNAYVTGETSSSDFPVVPLSNLGLVTNALQTSNQFGMEGYDAFVSKIVTGSPEVQIRTD
GDVTVDEDGTLTEEYEILLTTQPTADVTVQVASDTEVNATNSVTFTSANWFIPQTIAVTA
VDDLVWEGSHTGTLTHSVTSTDTVYGDGGISITVDGTASSIINPSIVDNDLPPLIISEIL
YNPESVEDDWEWIEVYNDGTTPIDLSGFVLDDDDLGILAAANIASGTIAPGQTGILYNAE
DLTAAAFEAAWGSGLNLIPVTDWPALANNGDRIGLWDSLTSYNSRDFTTTTDEVNYDNAG
PWPSLSGSGESSIYLTDLSADNNTGGNWALNNIGTTSATGTAYESANLGGNSGLDIASPG
SIDTTLPMANLTAADVTVAGGTSYTFTVEYSDDRAIDVSNLDNNDIIVVTPTGENRAATL
QSTTPTGNNTPITATYQIVPPDGTWDVTDDGTYTVRVQASEVTDTTGNALDAGSLGSFLV
DTNTPPTANAIADILVDEDAANQAIDLFAAFDDVEDADPDLTYTIINNSNPLLFDTTNID
PTAGTLTLDFAADVSGSTNLTLRGTDTGGKFVETTVAVTVNGVNDAPSFTPGVDLSIDED
AGSQTVTGWASAISAGGGSDEVSQNLTFNLTTDNDSLFAALPAIASDTGTLTYTPAANVS
GTATVTVTLQDDGGTANGGEDTSTVRTFTIAIAPLNDAPILSNISLSGSEDTAIAFSESD
FTAAFSDTESDELSAISITALPSNGILTLAGAQVTAGSAIAPSDLAKLVFTPDADFNGTT
SFSWNASDGKDFSDNDATVNLTVTPENDPPTVDEAIGDRTAIVGDLVSFAIAATHFNDID
GDDLVYTATLNNGADLPSWLSFDSSSGTFSGTPDAADVGEFSIKITASDGLEAVSQTFGV
TVTPNFEEEDPVIEDPVIEDPVNEDPVNEDPVIEDPVIEDPVTEDPVNEDPVNEDPVTED
PVIETPVIEDPVNEDPITEDPVIEDPVIETPVIETPVNEDPVIEDPVIETPVIETPVNED
PVIEDLNTVDPPEIPIAPQNNLPVSDRCCDCEFGVEQTEFNAALSNITPPIPNSTEADRL
GNEENNVILGSDRADGLFGFSGNDALFGRGNDDNLYGDEGDDILRGGRGSETPVGDTIDR
DRLEGGSGDDILHGNEGNDTIYGGSGSDRAHGGKDDDLVFGDRGNDILWGDLGNDLIFGG
VGSDRSPADDDDRDLIFGNRGDDEIHGNQGSDSLYGGRDDDSIWGGKDGDLIWGDRGNDR
LMGDNGDDTVFGGVSDSTVGDPDGRDWLFGGEGNDFLNGNESEDTLIGGNGNDTLHGGQN
DDILFGNRGDDWLFGDFGADIFCGGDGSDRFVLHSSGGDRIIDFEDGIDRLVLSSGISFE
MLAIVESERGAIVRSGDRILVTLDNIEFGAIDRDDFAML
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcacctcgttccgcttccctccgacagcgaatcgaattccccctctcaaacc
gcacttcccctcagctttattcccaatgtcggccagaccgatgcagaagttgcatttaac
ctccgccacgatggggtcaatatttttttcacccccgacgaaattgttttcaatagcatc
aatcaactcgaaagtgaaacggtttcctccaccgtggaaatgcagtttctcggggccaat
cccaatcctgaaattaccggattgcaagaattagaaggagtggccaactttttctacggc
aacgacccggaaaaatggttgacaaatgttcccacttatggcggcatagtctatcaagat
ttatatccgggaattgatttagtttatcgcggtacggcaggaaatttaaagcgcgatttt
attgtcgatgctggggtcgatcccaatttaattcaaattgactatagcggcatcgaaaac
atcgagattgacgaagaaggagacttaattttaaccactgagtacggagaatttatcgaa
gatgctcccttcagttatcagtatattaacggcgaaatcgtcgaagttgaaagtcgctac
aaattactcgacgagaatcgtattggttttgagttaggcgcctacaatcccgcttacgcc
gtggcgatcgatccggtcttagaatactctacctatttagggggaacgggagatgatggc
ggcagcagcatcgccgtagataatgcaggaaatgcctacatcaccggggcaactttatcg
agcgatttccccgctaccgttgggggaaatcaagctgtagatgtatttgttgccaaactc
aatccgacaggaatgggattgctttacagcacctatatcggtggtagcaccatcgatgca
gggacggatattactgtcgataatttgggaaatgcttatattactggcagtacaaattca
atagatttccctaccctttctgcttttcaaactgcaaaagctggaggtaattttgatgca
aacgaggtatttattacaaaattagataatacaggaacattagcttacagcacttatctc
ggcggtactagcatagatatcggacgggggattgttgttgacagtaacggcgatgcttac
gttactggagaaacttattctacagattttaatagtgccaataataccaataatggcgct
gttgatgcttttgtcgcccgcatcaaagcatccggtgcagttttagcctacagtcgctat
gttggcggaaaacacatcgatcaaggtcagggaattgctattaatagcaatgaggaagtt
tatattactggagaaacctattcgactgcaacagattttaatacagatttcccagcgacc
tcgacgggtttacaggtcaatatcaatcaaggggataataccagcaatagtgatgccttt
atcgttaaattaaatacggcgggaacgaatgttgaatacgggacttatttcggaggaagt
aataccgatgaaggctacgggattgttgtcgatgacattggcaatatttacatagctggg
attaccgggtcgggaaccactgcaactcttccattaccaacgacggctggagtattacaa
gatacccacggcggtggaacgtttgatgtttttgtggcgaagtttaacgaaacgggagtt
acgcccgttttttcattagactattcgacctatttaggtggaatgggaaatgacaacgtt
cgcggaccgaagagtctcgccgttgatgatagcggtaatgcttacttaactggatatacg
cgaagtaatgattttcctctgttaccgccaacccttacaaatagtccgattcaacaagtt
tttgggggcggggacgatgggtttgttgcccaattaaataacgatgcgactgccttaact
tattctacttatctcggcggtacgagtgaagatcgcgcctacggtattgccctcgatagt
tcgggaaatgcttatgttactggagaaaccagttcttcggacttccccgtagttccttta
tctaatttgggtttagtcaccaatgctttgcaaacatccaatcaatttgggatggagggg
tatgacgcttttgtctccaaaattgtcaccgggtcgccggaagttcaaattcggactgat
ggcgatgtgaccgtagacgaagacggaacgttaacggaagagtacgaaattctcctgacg
acgcaaccgacagcagatgtaacggtacaagttgcgtcggatactgaagtgaatgctacc
aattcggtgacctttacttcggcgaattggtttattccgcaaacgattgcggtcacggcg
gtagacgatctagtgtgggaggggtcgcatacggggactctcacccacagtgtcacctct
accgatacggtttatggagatgggggaatttcaattactgttgatggtacggcgtcaagt
atcatcaatcccagtattgtcgataacgatttaccaccgttgattatttctgagattctt
tacaatcccgaaagtgtagaggatgactgggagtggattgaggtttataacgacgggacg
accccgattgatttatccgggtttgtcttggatgacgatgatttaggcattctggcggcg
gcgaatattgccagtgggacgatcgcccccggtcaaacgggtattctttataatgcggaa
gatctgacggcggcggcgttcgaggcggcgtggggaagcggactcaatcttatcccagtt
accgattggcccgccctggcgaataatggcgatcgcatcggattgtgggatagtttaacc
agttacaatagtcgcgattttacaacaacgactgacgaggtaaactacgataatgccgga
ccttggccgtcgttatccgggagtggcgaatcgtcgatctatttaaccgatctcagtgca
gataataatacggggggcaactgggcgttaaacaatattggcacaacttcggcaacggga
acggcttacgaaagtgctaacctcggcggcaatagtggcttagatatcgcttccccgggt
tcgatcgatactacgcttcctatggcgaatttgacggctgccgatgtgaccgtggctgga
gggacgagttacacgtttacggtcgagtatagcgacgatcgcgcgatcgatgtcagcaat
ttagataataatgacattattgtggtgacgccgacgggggaaaatcgggcggcgacccta
caaagtacgacgccgacgggcaacaataccccgattacggcaacctatcaaatcgtccct
cccgacggaacctgggacgtgaccgacgatggaacttacacggttcgagttcaagccagc
gaagtgaccgacacgaccggaaacgccctcgatgcgggcagcttggggagtttcctggtg
gatacgaatacgccgccaacggcaaatgcgatcgccgatatcctcgttgacgaagatgca
gcgaatcaggcgatcgatctgtttgctgcttttgacgatgtagaagatgcggatccagat
ttaacttatacgattatcaacaatagtaatcccctactgttcgacacgacgaatatcgat
ccgacggcgggaaccctcactctcgacttcgccgccgatgtcagtggaagcactaatctc
accttgcggggaaccgatacgggcggaaagttcgtagaaacgacggtggcggtaacggtc
aatggggtcaatgacgccccgagttttaccccgggggtcgatctcagtatcgacgaggat
gcgggttcgcaaacggtgactgggtgggcaagtgcgatttctgccgggggtggtagcgat
gaagtcagtcagaacttaacgtttaatctaacgacagataacgatagtttgtttgcggcg
ttacccgcgatcgcctcggatacgggaactctaacttatactccggcggcgaatgtgtcg
ggaacggcgacggtgacggtgaccttgcaggatgacggcgggacggcaaatggcggcgag
gatacgtcaacggttcgaacctttacgatcgcgatcgccccgcttaatgatgccccgatt
ctgagtaatattagcctatccggatcggaagatacggcgatcgcctttagcgaatccgac
tttactgcagcatttagtgacacggaaagtgacgaattatccgcaatttcgataacggct
ttaccgagtaacggaatattgaccctcgcaggggcgcaggtgaccgccggaagtgcgatc
gccccttccgacctcgccaagttggtatttaccccggatgccgactttaacggaaccact
agctttagctggaatgcctctgacggtaaggacttcagcgataacgacgcgacggtaaat
ttgacggtgacgccggaaaatgacccgccaacagtggacgaggcgatcggcgatcgcacc
gcgattgtaggggatttagtgagttttgcgatcgccgccactcattttaacgatattgac
ggcgacgatctggtttatactgcaaccttaaataatggcgccgatttacccagttggttg
agtttcgactcctccagtggaacctttagcggaacgccggacgccgcagatgtcggcgaa
ttcagtattaaaattaccgccagcgacggtctggaagccgtcagtcagacgtttggcgtg
acggttactcccaattttgaagaagaagatccggttatcgaagacccggttattgaagac
ccggttaacgaagatccggttaacgaagatccggttattgaagacccggttattgaagat
ccggttaccgaagatccggttaacgaagatccagttaacgaagatccggttaccgaagat
cccgttattgaaactccagtcatcgaagatccggttaacgaagatccgattaccgaagat
ccggttatcgaagatccggttatcgaaactccagttattgaaactccagttaacgaagat
ccggttatcgaagatccggttatcgaaactccagttattgaaactccagttaacgaagat
cccgttatcgaggatctgaatactgtcgatcctccagaaattccgatcgccccccaaaat
aaccttcctgtcagcgatcgctgttgtgattgcgagttcggcgtagaacagactgaattc
aatgcagcattaagtaatataacaccgcctattcccaattcaaccgaagccgatcgcctt
ggaaatgaagaaaataacgtcattttgggcagcgatcgcgccgatggcttatttggattt
agcggtaatgacgccttattcggtcgggggaatgacgataacttatatggtgacgaaggg
gatgacatccttcgcgggggacggggaagcgaaaccccagtgggagatacgatcgatcgc
gatcgcctcgaagggggttccggggacgatattcttcatggaaatgaaggtaatgacacg
atttatggcggatctggcagcgatcgcgcccacggcggcaaagatgacgatttagtgttc
ggcgatcgcggaaacgatattttatggggagatttgggcaacgatctcattttcggcggg
gtcggcagcgatcgatcgcccgccgacgacgacgatcgcgatctgatcttcggcaatcgt
ggcgacgatgagatccacggcaatcaaggatccgatagtctctacggcggacgagacgac
gattcgatctggggagggaaagacggcgatctgatctggggcgatcgtggaaatgaccgc
ctgatgggggataacggcgatgataccgtcttcggtggggttagcgattccaccgttggc
gaccctgacggtcgagattggttattcggcggggaagggaacgactttctcaacggaaac
gaaagcgaggacacccttatcggaggaaatggaaacgacaccctccacggcgggcaaaat
gacgatattctcttcggaaatcgcggcgatgattggttattcggcgatttcggggccgat
atcttctgcggtggcgacggtagcgatcgcttcgtgttacacagtagtggaggcgatcgc
attatcgattttgaagacgggatcgatcgcctggtattatcatctgggataagttttgag
atgttggcgatcgttgaaagcgaacggggggcgatcgttcgttccggcgatcgcatttta
gtgactctcgataacatcgaatttggggcgatcgatcgcgatgattttgcaatgttgtaa
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