Oxynema aestuarii: HCG48_20990
Help
Entry
HCG48_20990 CDS
T06528
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
oxy
Oxynema aestuarii
Pathway
oxy00260
Glycine, serine and threonine metabolism
oxy00460
Cyanoamino acid metabolism
oxy00630
Glyoxylate and dicarboxylate metabolism
oxy00670
One carbon pool by folate
oxy00680
Methane metabolism
oxy01100
Metabolic pathways
oxy01110
Biosynthesis of secondary metabolites
oxy01120
Microbial metabolism in diverse environments
oxy01200
Carbon metabolism
oxy01230
Biosynthesis of amino acids
oxy01240
Biosynthesis of cofactors
oxy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HCG48_20990
09102 Energy metabolism
00680 Methane metabolism
HCG48_20990
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HCG48_20990
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HCG48_20990
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HCG48_20990
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HCG48_20990
Enzymes [BR:
oxy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HCG48_20990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QIZ72764
UniProt:
A0A6H1U1Q2
LinkDB
All DBs
Position
5231913..5233196
Genome browser
AA seq
427 aa
AA seq
DB search
MTSSNLDFLAETDPTVAGLIGQELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGL
PRKRYYGGCEYIDGIEQLAIDRAKELFGAAWANVQPHSGAQANFAVFLALLQPGDTIMGM
DLSHGGHLTHGSPVNVSGKWFKVEHYGVSPETEQLDYDRIRELAKQHQPKLIICGYSAYP
RVIDFEKFRAIADEVGAYLMADIAHIAGLVATGHHPNPLPHCHVVTTTTHKTLRGPRGGL
ILTDDAELGKKFDKAVFPGSQGGPLEHVIAAKAVAFGEALKPEFKAYSGQVIENAKALAA
ALQQRGFKLVSDGTDNHLMLVDLRSISMTGKQADRRVSQVNITANKNTVPFDPESPFVTS
GLRLGSPAMTSRGMGTEEFTEIGNIIADCLLNPEDEAIAADCRRRVAQLCEKFPLYPHLN
VPVTAIA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcaagtaacttagactttttagccgaaaccgatccgaccgttgccggactcatc
ggacaagaactccaacgccaacgggatcacttagagctcattgccagtgaaaacttcacc
tcagccgccgttttggccgctcagggttccgtgctgaccaataaatacgccgaaggactg
ccccgcaaacgctactatggcgggtgcgagtacatcgacggaatcgaacagttggcgatc
gatcgcgccaaagagctgtttggggccgcttgggccaacgtccaaccgcactccggagcc
caagcgaactttgcggtcttcctggccttgctccaacccggcgatacgattatggggatg
gacttgtcccacgggggtcatttaacccacggttccccagtgaacgtgtctggcaagtgg
tttaaagtcgagcattacggggtcagtcccgaaacggagcaactcgattacgatcgcatc
cgcgaattagccaaacaacaccagccgaaattaatcatctgcggttactccgcttatccg
cgcgtcatcgacttcgagaaattccgggcgatcgccgacgaagtgggcgcctacttgatg
gccgatatcgcccacattgccggattggtggccaccggacaccaccccaatcccctgccc
cactgccacgtggtcaccaccaccacccacaaaaccctacgcgggccgcgcggcgggcta
atcctgaccgacgacgccgaactgggtaaaaaattcgataaagccgtatttcccggcagc
caaggcggtcccctcgaacacgtgattgcggccaaagccgtcgccttcggcgaagccctc
aagccggaatttaaagcctatagcggccaagtgattgaaaacgccaaagccttagcggca
gccctgcaacagcgcggtttcaaactcgtttccgacggtacggacaatcacctgatgtta
gtggatctgcgatcgatttcgatgaccggaaaacaggccgatcgccgcgtcagccaggtc
aacattaccgccaataaaaacaccgttcccttcgatcccgaatcgccctttgtcaccagt
ggtttgcgcctgggatctcccgcgatgaccagccgggggatgggaaccgaggaattcacc
gaaattggcaatatcatcgccgattgcctcttaaatcccgaagacgaggcgatcgccgcc
gattgtcgccgtcgggtcgcccagttgtgcgagaaattcccgctttacccgcacttgaac
gtacccgtcaccgcgatcgcctag
DBGET
integrated database retrieval system