Oxynema aestuarii: HCG48_21755
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Entry
HCG48_21755 CDS
T06528
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
oxy
Oxynema aestuarii
Pathway
oxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCG48_21755 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oxy03019
]
HCG48_21755 (recQ)
03400 DNA repair and recombination proteins [BR:
oxy03400
]
HCG48_21755 (recQ)
Enzymes [BR:
oxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCG48_21755 (recQ)
Messenger RNA biogenesis [BR:
oxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HCG48_21755 (recQ)
DNA repair and recombination proteins [BR:
oxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HCG48_21755 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
HTH_40
Helicase_C
RecQ_Zn_bind
Sigma70_r4_2
ResIII
GerE
HTH_38
HTH_23
DprA_WH
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QIZ73878
UniProt:
A0A6H1U4R4
LinkDB
All DBs
Position
5440270..5442696
Genome browser
AA seq
808 aa
AA seq
DB search
MTPPGNLERSLKQFFGYDSFRPGQREIVEAALADRDQLIVMPTGGGKSLCFQLPALLKPG
VTVVVSPLIALMQDQVEALQNNGIGATFLNSTLNWEEQRSREMAIVTGRVKLLYVSPERL
VGDRFLAFLEVVRARVGLSSFAIDEAHCVSEWGHDFRPEYRQLRLLRDRYPQVPVMGLTA
TATDRVRHDIVSQLALQNPRVHLASFNRPNLYYEVRQKRRQSYGDLLHIIREIGGSGIIY
CLSRRRVEELAARLQSDKIKALAYHAGLGDEERANSQRRFIRDDVQVMVATIAFGMGINK
PDVRFVVHYDLPRNLESYYQESGRSGRDGEPAHCALFYSYGDLKTIEYLIDQKPDPQEQL
IARQQLRQILNYVEGTDCRRTIQLGYFGERFPGNCENCDNCRNPKPIEDWTVEAMKFLSC
VARTKERFGTNHIIDVLRGSKKAKVLRYNHQELSTFGIGTDKTADEWKMLARSLVHQGLL
NETDDGYSVLKLNAASWEVMRKQRQVQLAVTRKAEETPLDGRERLAAEVEMLFDLLRSLR
KEIADTESLAPYMVFADSTLKLMARERPQTPEALGSLAGVGEYKLVKYGDRFLSAIQTYC
QEQGLSAAPSSTPRADDDLFQTLRALRKKIAAEEALPAYMIFPDRTLQEMARRQPQTLAA
FRKIKGVGAQKLEKYGSSFLAEIQAYCGENPPFEPEDEPEDEPDSEALSNTQALTLRLHC
EGWSIEEIARHRQLSPRTIASHLAELLEIDDRVEIDRLVNRNRQVEIWQALDLLGDRSLT
AIREHLGEHYSYDEIRFVRGRRRRVHQS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
gtgacacccccgggaaacttagaacggtccctcaaacagttttttggatacgacagtttt
cgccccggacaacgagagattgtcgaagccgccttagccgatcgcgatcaactgatcgtg
atgccgaccggaggcggaaaatccttgtgctttcaacttcccgcgttgctcaaaccgggg
gtcaccgtggtggtctcgccgttgatcgccctgatgcaagatcaagtcgaagcgctgcaa
aataatgggatcggggcgacgtttctcaacagtaccctcaattgggaggaacagcgatcg
cgggaaatggcgatcgtcacgggtcgcgtcaagctgctctacgtctctccggaacgcttg
gtcggcgatcgctttctcgcctttttagaagtggtgcgcgcccgagtggggctgagtagt
tttgccattgacgaagcccactgcgtttccgaatggggtcacgattttcgcccggaatac
cgccaactgcggctgttgcgcgatcgctatccccaagtccccgtcatgggtctgacggcg
acggcgaccgatcgcgtccgccatgatatcgtctcccaactggccctccaaaatccccgc
gtccacctcgccagtttcaaccgtcccaatctctattacgaagtccgtcaaaaacgcagg
cagtcctatggcgatttattgcatattattcgcgaaatagggggttctgggattatctac
tgtctcagtcgccgccgggttgaagagctggccgcccgactacaaagcgataaaatcaaa
gctttagcctatcatgccggattgggcgacgaagagcgggcgaactcccaacggcggttt
attcgcgatgacgtgcaagttatggtcgcgacgatcgccttcgggatgggcatcaacaaa
cccgacgttcgctttgtggtgcactacgacttaccgcgcaatctcgaaagttactatcaa
gaatccgggcgatcgggacgggacggcgaacccgcccattgcgcccttttttacagttac
ggcgatttaaaaacgatcgaatatttaatcgaccaaaaacccgacccgcaagagcaatta
atcgcccgccaacaattacgccaaatcctcaattatgtcgaaggaaccgactgtcgccgc
acgattcaattgggctattttggcgaacgctttcccgggaattgcgaaaactgcgataac
tgccgcaatcccaaaccgatcgaggattggaccgtagaagcgatgaagtttctctcttgc
gtggcgcgcacgaaagaacgcttcggaaccaatcatattatcgacgtcttgcgcgggtcg
aaaaaagccaaagtcttgcgctacaaccatcaagaattatcgacctttggaatcggtacc
gataaaaccgcagacgagtggaaaatgctggcgcgatcgctcgtccaccaaggcttatta
aacgaaaccgacgacggttattccgttctcaaattgaatgcggcgagttgggaagtgatg
cgaaaacagcgccaagtccagctcgccgtcacccgcaaagccgaagaaacccccttggac
gggcgcgaacgcctcgccgccgaagtcgaaatgctcttcgatctgctgcgatcgttgcgt
aaagagatcgccgacaccgaatccctggccccttatatggtctttgccgattcgacctta
aaattgatggcgcgagaacgtccccaaaccccagaagccttgggcagtttggcgggagtc
ggcgaatataaattagttaaatacggcgatcgcttcttgagcgccattcaaacctactgt
caggaacaaggactgagtgcggcgccgagttcgaccccgagggcagacgacgatctgttt
caaacattgcgggcattacgcaaaaaaattgcggcggaagaagcccttcccgcctatatg
atttttcccgatcgcaccttgcaggaaatggcgcgacgccaaccccaaaccctagccgca
tttcgcaagattaaaggcgtcggcgcccaaaaactggaaaaatacgggtctagcttcctg
gcagaaattcaagcctactgcggcgaaaacccccccttcgagccggaagacgagccggaa
gacgaacccgactccgaagcactctccaacacccaagccctcaccttgagattgcattgc
gaaggctggagcatcgaagagatcgcccgacaccgccaactcagcccccgcacgatcgcc
agccatttagccgaattactcgaaattgacgatcgcgtcgaaatcgatcgcctcgtcaac
cgcaaccgacaagtcgaaatatggcaggccctcgacctgctcggcgatcgctcgttaacc
gccatccgcgaacatttaggagagcattacagttacgacgaaatccgcttcgtgcgcgga
cgcaggcgacgagttcaccagagctga
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