Oxynema aestuarii: HCG48_22980
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Entry
HCG48_22980 CDS
T06528
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oxy03021
]
HCG48_22980 (nusA)
03009 Ribosome biogenesis [BR:
oxy03009
]
HCG48_22980 (nusA)
Transcription machinery [BR:
oxy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HCG48_22980 (nusA)
Ribosome biogenesis [BR:
oxy03009
]
Prokaryotic type
rRNA transcription factors
HCG48_22980 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_NusA_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
QIZ73107
UniProt:
A0A6H1U415
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All DBs
Position
complement(5754297..5755490)
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AA seq
397 aa
AA seq
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MSMVSLPGLRDMIDNISQERNLPKHAVQAALREALLKGYERYRRTLSMDRQHFDETFFDN
FEIELDTEEEGFRVLSTKTIVETVSSADHEIALQEVREVAAEAQLGDTVVLDVTPDQGDF
GRMAAIQTKQVLAQKLRDQQRKLIQEEFEDLEGTVLQARVLRFERQSAILAVNSGFGNPE
VEAELPKREQLPNDNYRANATLKVYLKKVREGPHRGPQLLVSRADAGLVVYLFANEVPEI
EDEVVRIVAVAREANPPSRHVGPRTKIAVDTLEREVDPVGACIGARGSRIQVVVNELRGE
KIDVIRWSPDPATYIANALSPAKVDEVRLVDPDSRQAHVLVPEDQLSLAIGKEGQNVRLA
ARLTGWKIDIKDSAKYEEETVQVEETAEEVVPLEESE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggttagtttgcccggactccgggacatgatcgataatatctctcaagagcgg
aatttaccgaaacacgcggtacaagcggccttgcgcgaagccctcctcaaagggtacgag
cgctaccgtcgcaccttgagtatggatcgccagcattttgacgaaacctttttcgacaac
ttcgagatcgaactcgataccgaagaagagggatttcgggtgctttcgaccaaaacgatc
gtcgaaacggtcagcagtgcggatcacgagatcgccttgcaagaagtgcgagaagtggcc
gccgaagcccaattgggagatacggtggtgttagatgtcaccccggaccaaggcgatttc
gggcggatggcagcgattcaaaccaaacaagtgctggcgcaaaaactgcgcgaccaacag
cgcaaactgattcaagaagagtttgaggacttggaaggaacggttttacaagcgcgggtc
ttgcgtttcgagcgacagtcggcaattttggcggtcaacagtgggtttggcaatcccgaa
gtcgaagccgaattgcccaaacgcgagcagttgcccaacgataattatcgggcgaatgcg
accttgaaggtgtatctcaagaaagtccgcgaaggaccccatcgagggccgcaattgttg
gtatcgagggcagacgccggattggtggtttacttgtttgccaacgaagtgccggaaatt
gaagatgaagtcgtgcggattgtcgccgtagcgcgcgaagccaatcccccctcccgtcac
gtcggaccgcgtactaagatcgccgtggatacgttagagcgagaagtcgatcccgtaggg
gcctgcataggggcgcgcggatcgcggattcaggtcgtggtcaacgaactgcgcggggaa
aaaatcgacgtgattcgttggtctccggacccggcgacctatatcgccaatgccttgagt
ccggcgaaagtggacgaagtgcgcctagtcgatcccgacagccgccaagctcacgttttg
gttccggaagaccagctcagtttggcgattgggaaagaggggcagaacgtccgactggca
gctcgactgaccgggtggaagatcgatatcaaggatagtgcgaaatacgaagaggaaaca
gtacaagtggaagaaactgccgaggaggtcgtgcccctggaagaatccgagtaa
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