Oxynema aestuarii: HCG48_23255
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Entry
HCG48_23255 CDS
T06528
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
oxy
Oxynema aestuarii
Pathway
oxy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HCG48_23255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oxy02000
]
HCG48_23255
Transporters [BR:
oxy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HCG48_23255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_21
AAA_16
AAA_18
AAA_29
nSTAND3
AAA_5
nSTAND1
Mg_chelatase
AAA
NB-ARC
PRK
NACHT
MobB
RNA_helicase
TrwB_AAD_bind
AAA_33
TsaE
Motif
Other DBs
NCBI-ProteinID:
QIZ73156
UniProt:
A0A6H1U3Z7
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All DBs
Position
5826187..5828109
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AA seq
640 aa
AA seq
DB search
MSDTVLDVRNLQVQFETDEKLVTAVNGISFEVRRGQTLGIVGESGSGKSVTSLAVMGLVP
NPGKVADGEIWFRDDAAADPVNLQRLSREEKQPYRGSRISMIFQEPMSALNPVYDIGFQM
TEAILMHQKVSVSEARRQAVARLQEVKLLPSDEQLRDRLEGREGMSEREIASAINDRKLA
ILKRYPHELSGGQIQRVTIAMAIACNPTLLIADEPTTALDVTVQASILQLLRELRDARGM
SMIFITHDLGVIAEIADRVAVMYRGKIVESGSVLDIFAQPQHPYTKGLLACRPQPDKRLV
YLPTVADFMEEVTDDSGEVEMRSKSPDRSPTPEAAAAVATPTEVPPTEVSAVESDRRLSQ
LQERGVLLSANNLQVAFPIRGIFGETQRYFMAVKGVSFEVYLGETLGLVGESGCGKTTLA
RSLLRLVEPTGGEVIFDGKNLIDLEGLSLRQVRQQMQIIFQNPFGSLNPRMNIGALVMEP
LRIHFPKQKKATHRDRAAYLLERVGLNPELMNRYPHEFSGGQRQRVCIARALALNPKFII
CDESVSALDVSVQAQVLNLLKELQQEFELTYIFISHDLSVVKFMSDRIMVMNQGKIEEIG
PAEQIYRQPQQAYTRSLIDSIPTGSLERIKEQQAGRQLSA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacggttttagacgttcgcaatttgcaggttcaatttgaaaccgacgaaaaa
ctcgttaccgccgttaacgggatttcattcgaggtccggcgcggtcaaactctcgggatt
gtcggcgagtccggttccggaaaatcggtgacctccttagccgtgatgggattagtcccc
aatcccggcaaagtcgccgacggcgaaatctggtttcgcgacgacgccgccgccgacccg
gtgaacttgcaacgcctgtcacgggaagaaaaacaaccctatcgcggcagtcggatttcg
atgatttttcaggaaccgatgagcgccctcaatccggtctacgatatcggtttccaaatg
accgaagccattttaatgcaccaaaaggtctcggtctcggaagcccgcagacaagcggtg
gcgcgcttgcaagaggtcaaactcctcccgagtgacgaacagttgcgcgaccgtctcgaa
gggcgtgagggcatgagcgaacgcgagatcgccagcgccattaacgatcgcaaactcgcc
atcctcaaacgctatccccacgaactctccggcggtcaaattcagcgcgtgacgattgct
atggcgatcgcgtgcaatcctaccctattaatagccgacgaaccgaccaccgccttagat
gtgacagttcaagcctcgattctccaattattgcgggagttgcgcgacgcccggggcatg
tcgatgatctttattacccacgatttgggcgtgattgcggaaattgccgatcgcgtggcg
gtgatgtatcgcggcaaaattgtcgagtccggttcggtgctcgatatttttgcccagccc
caacatccttatacaaaaggactgttagcctgtcgtccccaaccggacaaacgcctggtt
tacctgcccacggtggccgattttatggaagaggtaaccgacgactccggggaagtggaa
atgcgatcgaaatcccccgatcgatcgccgaccccggaagcggcggcagcagtggcaacc
cctacagaagtcccccctacagaagtcagtgctgtcgagagcgatcgccgtttgagtcaa
ttgcaagaacgcggggtgttactctcggcaaataacttgcaagtcgcctttcctattcgc
ggtattttcggcgaaacgcaacgctattttatggcggttaaaggggtttccttcgaggtc
tatttaggcgaaactctcggtttagtcggcgagtccggttgtggcaaaactaccttagcc
cgcagtttgttgcgcttggtagaaccgacgggaggcgaggtcatttttgacggcaaaaat
ttaatcgatttagaggggttatccctgcgccaagtgcgccaacaaatgcaaattatcttt
caaaatcccttcggttcgctcaatccgcgtatgaatatcggcgccttggtgatggaaccg
ttgcggattcattttcccaagcagaaaaaggccactcaccgcgatcgcgccgcctatttg
ttggaacgagtcgggttaaatccggagttgatgaatcgctatcctcacgagttttcgggc
ggtcaacggcaacgggtttgcattgcgcgggctttggcattaaatccgaagtttattatc
tgcgacgagtcggtttcggcgttggatgtttcggtgcaagcccaggtactcaatttatta
aaagagttgcaacaagagttcgagttgacttatatctttatttcccacgatttaagtgtg
gtcaagttcatgagcgatcgcattatggtgatgaatcaggggaaaattgaggaaatcggc
ccggcggaacaaatttatcgccaaccgcaacaagcctacacgcgatcgttgatcgattcg
attcctacggggagtttggaacggattaaagaacaacaagcgggtcgtcaactgtcggct
tag
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