Oxynema aestuarii: HCG48_24355
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Entry
HCG48_24355 CDS
T06528
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oxy03016
]
HCG48_24355 (miaB)
Enzymes [BR:
oxy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HCG48_24355 (miaB)
Transfer RNA biogenesis [BR:
oxy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HCG48_24355 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Lipase_GDSL_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QIZ73347
UniProt:
A0A6H1U4P7
LinkDB
All DBs
Position
6088436..6089800
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AA seq
454 aa
AA seq
DB search
MSSSPRRYHITTFGCQMNKADSERMAGILDNMGFKWVEDPLAADLVVYNTCTIRDNAEQK
VYSYLGRQAKRKQEKPDLTLVVAGCVAQQEGEALMRRVPELDLVMGPQHANRLQDLLDDV
FAGNQVVATEPIHIIEDITKPRRDSRVTAWVNVIYGCNERCSYCVVPNVRGIEQSRTPEA
IRAEMEELGRQGYKEVTLLGQNIDAYGRDLPGTKEDGRHLYNFTDLLYFVHDVPGIERIR
FATSHPRYFTERLIRACRDLPKVCEHFHIPFQSGDNDVLKAMSRGYTQEKYRRIIDKIRE
LMPDAAISADAIVGFPGETEEQFENTLKLVDDIGFDQLNTAAYSPRPGTPAALWENQLSE
EVKSDRLQRLNHLVGVRAAERSQRYGGRIEEVLVEDLNPKDPTQVMGRTRSNRLTFFTGD
LDRLKGQLVKVKITEVRAFSLTGEPLEVAQLVTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttctcctcgccgatatcatattacaaccttcggctgtcagatgaacaaagcc
gactcggagcgcatggctggtattctcgataacatgggcttcaagtgggtggaagacccg
ttagcggcggatctcgtcgtgtacaacacctgcacgattcgcgacaatgcagaacaaaaa
gtttattcttatctgggccgacaagccaaacgcaaacaagagaaaccggatttaacctta
gtggtcgccggatgcgtggcgcaacaggaaggggaagcgctgatgcggcgggttccggaa
ctggatttggtgatggggccgcaacatgcgaaccgcctgcaagatttgctcgacgacgtg
tttgcgggcaatcaggtggtcgccacggaaccgattcatattatcgaagatatcaccaaa
ccgcgccgggatagtcgggtgacggcttgggtgaacgtgatttacggttgtaacgaacgc
tgcagctactgcgtggttccgaacgtgcgcggaatcgagcaatcgcggacgccggaggcg
attcgggcggaaatggaggaactcggacgtcaggggtacaaggaagtgaccttactcgga
cagaatatcgacgcttacgggcgcgatttgccggggacgaaagaggacggacggcatttg
tataattttaccgatctgctctatttcgttcacgacgttccggggatcgaacggattcgg
ttcgcgacgagtcacccccgttattttacggaaagattgattcgcgcttgtcgggatttg
ccgaaggtttgcgaacattttcacattccgtttcagtcgggggataatgacgtgctcaag
gcgatgtcgcggggatatacgcaagagaaatatcgccgaattatcgataaaattcgcgaa
ttgatgccggatgcggcgattagtgcggatgcgatcgtcgggtttccgggagaaacggaa
gaacagtttgaaaatacgctcaaattggtcgacgatattgggttcgatcagttgaatacg
gcggcgtattcgccgcgtcccgggactccggcggcgctgtgggaaaaccagctttcggaa
gaggtgaaaagcgatcgcctccaacggttgaatcatttggtgggggttcgcgccgccgaa
cgatcgcagcgttatgggggacggattgaagaggtgttagtcgaggatctcaatcccaaa
gatccgacgcaagtgatgggtcgcacgcgatcgaatcgtttgacctttttcacgggagat
ctcgatcgcctcaaaggacaattagtgaaggtgaaaattaccgaagttcgcgcctttagt
ttgacgggagaaccgttagaagtcgcgcaattagtgactgcataa
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