Oxynema aestuarii: HCG48_24535
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Entry
HCG48_24535 CDS
T06528
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oxy01011
]
HCG48_24535
Enzymes [BR:
oxy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HCG48_24535
Peptidoglycan biosynthesis and degradation proteins [BR:
oxy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HCG48_24535
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
QIZ73378
UniProt:
A0A6H1U3B8
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All DBs
Position
6135529..6136857
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AA seq
442 aa
AA seq
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MSFLVSLGIASCLSCVFSSSGELLTSPNPLGNPLKGDVFSAIARPVDRRRERHNRLQLKK
RKRRQLIRRTGDRVKLLAQQRSRSLFQGNSQGLGVRQTSAKPQANPSSDRGICSFSTADS
RAGRDRANPWYEGKPSRSRTTIEPMSRSPLVQHVFERLIDPHRGWIEPVWSPRRPVEAIV
VSADEVEIEDMVVIWGDRPNALQTVSWIPEVRKPGARPSRPSSVKTPFQVWVNGYLIAKF
PDRLRAEMFAQRIEELIDVPEDAAKLEPTLVRGLPAARIGDLYLFAIDPDLASHFKRHRD
LVAIEWIDNLRLALGAPRLSISQAQAQMYGLVETSQKLRGTASWYGPYFHGRLTATGEIF
DQNELTAAHKTLPFDTYLKVKNLQTGSEVIVRINDRGPYIPPRSLDLALGAARSIGSEEA
GVVPYEATIMKPGQKVVALSGD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttttggtatccctcggaattgcctcttgtttgagttgtgtattttcttctagt
ggagaattattgacttctccgaatccactgggcaaccccctaaagggtgatgttttttcc
gcgatcgctcgtccggtagacagacgcagagaacgacataatcgcttgcaattgaaaaaa
cgaaagagacgccaattgattcgccgaacgggcgatcgcgtcaaattgttggcccaacag
cgatcgcgttccttatttcaaggcaattcccaggggcttggggttcgccaaacgagcgcc
aaacctcaagccaaccccagttccgatcgcggcatatgtagcttttcgacggcggactcg
cgggcgggtcgcgatcgcgccaatccctggtacgaagggaaaccgagccgatcgcgaacg
acgatcgaaccgatgagtcgatcgccgttagtacagcacgtgttcgagcggctgatcgac
ccccatcgcggctggatcgaacccgtctggtctccccgccgtcccgtcgaggcgatcgtc
gtcagtgcggatgaagtcgaaatcgaggacatggtggtcatttggggcgatcgccccaat
gccttacaaaccgtatcttggatcccggaagttcgcaaacccggtgcccgaccgtcgcgc
ccctcctcggtcaaaaccccctttcaggtgtgggtcaacggctatttaattgctaaattc
cccgatcgcctgcgcgccgaaatgtttgcccaacgcatcgaagagctgatcgacgtcccc
gaagatgcggctaaactcgaaccgaccctcgtgcggggtttacccgccgcccggattggc
gatctctatttattcgcgatcgatcccgatttggcgagccatttcaaacgccatcgcgat
ctagtggcgatcgagtggatcgacaatctccgcctcgccctgggcgcccctcggctctct
atctctcaagcccaagcgcagatgtacggcttggtcgaaacgtctcaaaaactgcgtgga
accgcctcttggtacggcccttatttccacggacgactgaccgccaccggggaaattttc
gatcaaaacgaactgaccgccgcccacaaaaccttaccgttcgatacctatttaaaagtc
aaaaacctgcaaaccggatcggaagtgatcgtccgcattaacgatcgcggcccctacatc
cccccgcgaagcctggatttagccttgggcgccgcccgttcgatcggtagcgaagaagcc
ggagtcgtcccctacgaagccacgatcatgaaaccgggtcagaaagtggttgcgctttcc
ggggactaa
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