Oxynema aestuarii: HCG48_24975
Help
Entry
HCG48_24975 CDS
T06528
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HCG48_24975 (tnpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
RuvC_1
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QIZ73452
UniProt:
A0A6H1U3K6
LinkDB
All DBs
Position
complement(6256413..6257627)
Genome browser
AA seq
404 aa
AA seq
DB search
MLLGFKTQLKVNLTQRQKLARHAGVARHAYNWGHGLCLGILSHNAGCRPDEKIKFPTAID
LHKWLNKLVKPENLWYYEVSKCAPQYALRHLAQAWQDCFKKKKSRPKFKKKGRQDSFTLD
GTIKILSENKIQVPVIGILKTYERLSGNYQPKNVTISREADRWFISFKIDVNVTPTEKKT
DVVGIDLGIKALATLSTGVSIEGIKAYKKHSNKLARLQRQVSRKSLGSANRKKSQLQVQK
LHRKIANLRKDTLHKLTSQLCKNHAVNVIEDLNGSGMMANHKLAKSIADMGFYEFRRQME
YKSQIYGSQLIIVDRFYPSSKICSNCGSIKDSLLLSERLFGCDHCHLKIDRDLNAAKNLE
KIGRATAKLTPVDKSELTPLVEAGSKIDSNVLFIKLSDLMGKFG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttattagggtttaaaacacaacttaaagttaatctgacccaacgacaaaaactcgct
cgtcatgcgggagtggcgcgtcatgcttacaattggggtcacgggttgtgtttaggaatt
ttatcacataatgccggttgtcgtcccgatgaaaaaatcaaatttcccacagctattgac
ttacataaatggttaaataagttagtaaaaccagagaatctgtggtattacgaagtttct
aagtgtgcccctcaatacgctctcagacatctcgcccaggcgtggcaagattgctttaaa
aaaaagaaatctagacctaaatttaagaaaaaaggcagacaagacagctttactctagat
ggaactataaaaatattatctgaaaataaaattcaggttcctgtcattggaattctgaaa
acttatgaaagactatcggggaattatcaacccaaaaatgtgacgattagtcgagaggca
gatcgctggtttatttcgtttaaaatagatgtcaacgtgacccccaccgagaagaaaaca
gatgtagtggggatagatttggggataaaagcgcttgccaccttatcaacgggagtaagt
atagaaggaataaaagcatataaaaagcattcaaataaactagctagactccaaagacaa
gttagccgaaaaagtctcggctctgccaatcgaaaaaagtcccagcttcaagtccaaaaa
ctccatcggaaaatcgctaatctcagaaaagatacgttacataagttgacctcgcaatta
tgcaagaaccacgccgttaatgtgatagaagacttaaacggatcgggcatgatggccaat
cataaactagctaaatctatcgccgatatggggttttatgaattccgacggcagatggaa
tataagagccaaatatatgggtcacaactaataatcgtagacagattttatccatctagt
aaaatctgttctaattgtggaagcattaaagactcattactcttatcagaaagactgttt
ggttgcgaccattgtcatctcaaaatagacagagatttaaacgcagccaaaaatctggaa
aaaataggccgagctacggccaaattaacgcctgtggacaagagcgagctgactcccttg
gtagaagcaggaagtaaaatcgactcaaacgtattgttcatcaagctttcagacttgatg
ggtaagtttgggtaa
DBGET
integrated database retrieval system
