Prosthecochloris aestuarii: Paes_0474
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Entry
Paes_0474 CDS
T00732
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
paa
Prosthecochloris aestuarii
Pathway
paa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Paes_0474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paa03400
]
Paes_0474
DNA repair and recombination proteins [BR:
paa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Paes_0474
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Paes_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_15
RsgA_GTPase
AAA_22
nSTAND3
AAA_23
AAA_18
Viral_helicase1
cobW
MeaB
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ACF45530
UniProt:
B4S5D3
LinkDB
All DBs
Position
complement(508018..510858)
Genome browser
AA seq
946 aa
AA seq
DB search
MSAFSHIIIRGARVHNLKNISLDIPRNRLVVITGLSGSGKSSLAFDTIYAEGQRRFMETL
SAYARQYIGNIERPDVDSIDGLSPVISIDQKSTSRSPRSTVGTITEIHDFIRLLYAKAGR
RYDPATGHMLQKQSEEFITESILKLPEGTKVQLLAPLVTGRKGHYRELFDTLLKKGFLRI
RIDGEFREMEKGMQIERYKSHTIELVVDRLVITSGVNERLREAVKLAVGMSEHKSSVICA
PFESDEKEQFFSTKYAYSDGSVPIDTLAPNNFSFNSPYGACPECNGLGEIRQLSADLMVP
DKSLSINQGAIEPFGKPGKRNLWQVIRAIAKTFNFDLDTPFSKIPKAAADILLNGSGKKT
FDVTYSYAGKEHLYPQDFPGAISYVRELQKNSGTAKITEWAESFMFRQPCPECGGARLRK
ESLQVKIGDKNIHELESIPLPESLQLFRELPAKLTEKENLIATPILHEITKRIEFLLNVG
LDYLALNRSSQTLSGGEAQRIRLASQLGSQLSGVLYVLDEPSIGLHQRDNNKLITSLQHL
RDIGNTVLVVEHDKDTMLAADEIIDLGPGAGEHGGELVAQGLADKLNPHSLTAQYLNGQL
EVCTEKADRTEESENRFITLRGCRGNNLKGIDVSFPLARLICVTGVSGSGKSTLINETLY
PVLARHFYRSKIQTYPYESIEGLKLLDKVVNVDQSPIGRTPRSNPATYTGAFTFIRDFFA
RLPEAQIRGYKPGRFSFNVKGGRCETCQGAGTKKIEMNFLPDVYVECDTCKGKRYNRETL
QVRYKGSSIADVLDMTVEEALGFFEDFPRIRRILSTMQSVGLGYIKLGQQSPLLSGGEAQ
RIKLSAELAKIQTGNTLYILDEPTTGLHFQDIQHLLDVLQKLVDKGNTVIVIEHNLDIIK
NADWIIDLGPEGGNKGGNLVAEGTPEVIAAAQCSHTGKFLAAELKP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcattcagtcatatcatcatacgaggggccagggttcacaacctgaaaaacatc
tccctcgacattccccgcaacaggctcgtggtgatcaccggcctgtcgggatccggaaaa
tccagtctggcattcgataccatctatgccgaagggcagcgacgtttcatggaaaccctt
tcggcctatgcgcgtcagtacatcggcaatatcgaacgtcctgatgtggacagcattgac
gggctctctccggtcatatccatcgaccagaaaagcaccagtcgatcaccccgttcgacg
gtcggcaccattactgaaatccatgattttatccggctgctctacgccaaagcagggcgg
cgctacgatcccgcaaccggccatatgttgcagaaacaaagcgaggagttcattactgaa
tccatcctcaagctgcccgaaggaacgaaagttcagctcctggcccctctggttaccggc
agaaaaggacactatcgcgagctgttcgataccctcctcaaaaaggggtttctgcgcatc
cgcatcgatggtgaattccgggaaatggaaaaagggatgcaaatcgagcgctacaagagc
catactatcgaactcgttgttgacaggctggtcattacctccggcgtcaacgaacgtctg
agggaggctgtcaaactggctgtcgggatgtccgaacataaatcctctgtcatctgcgct
ccgtttgaaagcgacgaaaaagaacaatttttcagcaccaaatacgcctattcagacggt
tctgttccgatcgacacccttgcacccaataatttcagtttcaactctccctatggcgcc
tgccctgaatgcaacggcctcggcgagattcgccagttgtcggcagatctgatggtcccc
gacaagtcgctctcgatcaatcagggagcgatcgaaccattcggcaaaccgggaaaacgc
aatctctggcaggtcatcagagcgatcgcaaaaacattcaacttcgatctcgacacgccg
ttttcaaaaatcccgaaagccgctgccgatattctgctcaatggttccggaaaaaaaacc
tttgacgtcacctacagctatgcaggcaaggaacatctctatccgcaggatttccccgga
gccatcagctatgtgcgcgaactccagaaaaactcaggaacagcaaaaataactgaatgg
gcagaaagcttcatgttccgccagccatgtccggagtgcggcggagcccgtttgagaaaa
gaaagcctgcaggttaaaatcggtgacaaaaacatccatgagctcgagtccattcctctg
cctgaatcacttcagctctttcgggaacttccagcaaaactgacggagaaggaaaacctc
atcgcgaccccgattctgcacgaaatcacgaaacgaatagagttcctgctcaatgtcggc
cttgactacctggcactcaacagaagttcccagaccctctccggcggcgaagcacagcgc
attcgcctcgcatcacagctcggatcgcagctcagcggggttctttacgtgcttgacgag
ccaagcatcggactgcatcagcgtgacaacaacaaactgatcacatcgctgcagcacctg
cgcgatatcggcaacaccgttctcgtggttgagcatgacaaagacaccatgcttgccgct
gatgagattatcgatctcggaccgggagccggagaacatggcggcgagcttgtcgctcag
ggactggccgataagctgaaccctcattctttaaccgctcaatacctgaacggccagctc
gaggtctgcacagaaaaagcggacagaacagaagaaagtgaaaaccgtttcatcaccctc
cgcgggtgccgcggcaacaatctgaaagggattgatgtcagctttccgctcgccagactg
atctgcgtcacaggagtaagcggttcaggcaaatcaaccctgatcaatgaaacactctat
ccggttctggcaaggcacttctaccgatccaagattcagacctatccctacgaaagtatt
gaagggctgaaactcctcgacaaggtcgtcaacgtcgaccagtccccgataggcaggaca
ccgaggtcaaaccctgcgacctataccggagcgtttaccttcatccgggactttttcgcc
cgccttcctgaagcccagattcgaggctataaaccaggacggttcagtttcaacgtcaag
ggaggacgctgtgaaacctgtcaaggtgccggaacgaaaaaaatcgagatgaattttctg
cccgatgtctatgtcgaatgtgatacgtgcaaaggcaaacgctacaaccgcgaaacactg
caggtccgctacaagggaagttccatcgctgacgtccttgatatgaccgtcgaggaagcg
ctgggattctttgaagatttcccgcgaatacgccgtattctttccaccatgcagagtgtc
gggctcggctatataaagctcgggcagcagtcgcctctcctctcgggaggtgaagcgcaa
agaataaaactatcggctgaactagccaaaattcagactggaaataccctctatatcctt
gatgaaccaactaccggccttcatttccaggacatccagcacctccttgacgttctgcag
aaacttgtcgacaaaggcaacacggttatcgtcatcgaacacaatctcgatatcatcaaa
aatgctgactggatcatagacctcggcccggaaggaggcaataaaggcgggaacctggtc
gctgaaggaaccccggaagtcattgccgctgcacaatgctctcacacaggaaaatttctt
gctgcggaactgaagccttga
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