KEGG   Prosthecochloris aestuarii: Paes_0667
Entry
Paes_0667         CDS       T00732                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
paa  Prosthecochloris aestuarii
Pathway
paa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Paes_0667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paa03400]
    Paes_0667
Enzymes [BR:paa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Paes_0667
DNA repair and recombination proteins [BR:paa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Paes_0667
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 SH3_13 OB_YrrC UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 PIF1 Helicase_RecD NTPase_1 NPHP3_N HHH_2 AAA_22 nSTAND3 AAA_16 SLFN-g3_helicase RsgA_GTPase MeaB cobW HTH_IclR T2SSE NACHT UvrD-helicase MobB ABC_tran AAA_28 DEAD AAA AAA_24 AAA_29 SRP54 ATPase_2 KAP_NTPase ATP_bind_1 MMR_HSR1 TsaE CbiA AAA_14 AAA_5 GvpD_P-loop NB-ARC Mg_chelatase AAA_26
Other DBs
NCBI-ProteinID: ACF45715
UniProt: B4S6G0
LinkDB
Position
703322..705508
AA seq 728 aa
MSSGTGGGMDERCTGVVERVVFHSQESGFTVLRVRIDECSDPVTVTGVLPVVSEGESVDG
RGSWVHDRRYGLQFQTVELAVVPPATEEGIERYLASGMVRGIGSHFARTLVRAFGPEVFS
VIEKDPERMLELPGIGKKRMQMVVEAWDEQKAVRDIMVFLQSHGVGTARAVRIYKTYGDQ
AIQIVSRNPYRLVLDIQGIGFRTADAIASTLGIEPNSLVRAQAGIRHVLVELSGDGHCAI
RRPELLSAALRLLGIGEEIISEALKEEIIRGAIVQEEIDGSECCFPANLFRAESTVASRI
ASLCGGKLPWGDVDADDAIAWVGTSTGLELSPSQASAVQTAVASKVLVITGGPGVGKTTL
VNSILSILKREDIKVALCAPTGRAAKRLSESTGMDASTIHRLLEFDPCSFDFKHNRTNPV
RADLVVVDEASMIDIVLMQKLLLAVPDDAALIIVGDVDQLPSVGPGSVLSDIITSGAVPV
VRLTEIFRQAEASRIIVNAHRINRGELPVNPESTETSDFYLVPASGPADIFSKVMQLVLE
RIPAKFAMDPVRDIQVLTPMNKGGLGTLALNSALQKALNPSSKDGISRFGTMFAQGDKVI
QQVNNYDKEVFNGDIGMISSLDADGKKLTVLFGSNTIDYEFGELDELSLAYATTIHKSQG
SEYPAVIIPLSMQHLMLLQRNLLYTAVTRGRRLVMVIAESNAVLKAVRNGSAGGRLTNLA
ERLRAEFR
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgagcagcggtacaggtggagggatggatgagcggtgtacgggggttgtggaacgggtg
gtgtttcacagccaagagtcggggtttacggtgcttcgtgtgaggattgacgagtgtagt
gatcctgtaactgttactggcgtgcttcctgttgtttccgaaggggaatcggtcgatggt
cgcgggtcctgggttcacgaccggcgctatgggcttcagttccagactgttgagcttgcc
gtcgttcctccggctaccgaagaggggatcgagcgttacctggcttcaggtatggtgcgg
ggtatcggatcgcatttcgcaaggactctggtgcgggcattcgggccagaggttttttcg
gttatcgaaaaggatcctgagcggatgcttgaactgcccggtattggtaaaaagcggatg
cagatggtggtcgaagcctgggatgagcagaaagcagtgcgagatatcatggtgtttctt
cagtctcatggtgtcggaacggctcgtgccgtgaggatatataaaacctatggcgaccag
gctattcagatcgtgagccgtaatccatatcggcttgtgctcgatattcagggcatcggc
ttcagaacggctgatgcaatcgcatcgacccttggtatcgagccgaattctcttgtgagg
gcgcaggcaggtatacgtcatgtgctggtggagttgtcaggagatggtcactgtgccatt
cgtcgtccggaactgttatcggcagccctcagattgctgggcataggtgaagagatcatt
tcggaggctcttaaggaggagattattcgtggtgcgattgttcaggaggagatagatggc
tccgaatgctgttttccggcgaatctttttcgtgcagaaagcacagttgcatcgcggatt
gcctcattgtgtggcgggaaactgccgtggggtgatgtcgacgcagacgatgccattgca
tgggtgggaacgtctacggggcttgagttatcgccttcccaggccagtgcggtgcagact
gctgttgcgagtaaggttctggtcattaccggcggccccggtgtcggaaaaaccacgctt
gtcaattcgattctgagcattcttaaacgcgaagacatcaaagttgctttatgcgcccca
acgggcagagccgctaagcggctgagtgagtctacgggtatggacgccagcaccattcac
aggcttcttgagtttgatccttgttcttttgatttcaagcataaccggaccaatccggtc
agggctgatctggtggtcgttgacgaggcgtcgatgatcgatattgtcctcatgcagaag
cttctgctcgctgtgccggatgatgcggcactgattattgtaggggatgtcgatcagcta
ccgtcagtcggacccggctctgttctttccgatatcattacctccggtgcggttcccgtt
gttcgcctgacggagatcttccggcaggctgaggcttcccgcatcattgtcaacgcgcat
cgtattaatcggggagaactgccggtcaatcctgagagtacagagacatcggatttctat
ctggtgcctgcgtcaggtcccgcagatatcttttcgaaagtgatgcagcttgtgctcgag
agaattcctgcaaagtttgcaatggacccggtcagggatatacaggtgcttacccctatg
aacaagggcgggctgggaactcttgctctcaacagcgctcttcagaaggcgctgaaccct
tcaagcaaagacggcatcagccgcttcgggaccatgttcgctcagggcgataaggttatc
cagcaggttaataattatgataaagaggtttttaacggagatataggaatgatctcctca
ctcgatgccgatgggaaaaaactgacggtgttgtttggcagcaacactattgattatgag
ttcggcgagcttgatgaattgagcctggcttatgcgacaacgattcataaaagtcagggg
tccgagtatcccgccgttatcattcctctttccatgcagcatctgatgctgcttcagcgc
aacctgctctataccgctgtaaccagggggcggcggcttgttatggttattgccgagtcc
aatgcggtattgaaagctgtgcggaacggttctgccgggggacggttgacaaaccttgca
gaaaggcttcgtgcagagttccgatag

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