Prosthecochloris aestuarii: Paes_1556
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Entry
Paes_1556 CDS
T00732
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
paa
Prosthecochloris aestuarii
Pathway
paa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Paes_1556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paa03019
]
Paes_1556
Enzymes [BR:
paa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Paes_1556
Messenger RNA biogenesis [BR:
paa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Paes_1556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
AAA_19
Phage_integrase
EB1
Motif
Other DBs
NCBI-ProteinID:
ACF46574
UniProt:
B4S9A4
LinkDB
All DBs
Position
complement(1694725..1695981)
Genome browser
AA seq
418 aa
AA seq
DB search
MGFSSLNIIDPIARALREEGYATPTPIQAEAIPVILEGSDLLGCAQTGTGKTAAFAIPLL
QLLSERNTYEKKRKIRALVVTPTRELAIQIGESFKAYGRHTGLTNRVIFGGVNQNPQAAS
LRNGVDIVVATPGRLLDLMGQGHLHLRDVEILVLDEADRMLDMGFIHDIRKILAALPEKK
QSLFFSATMPSEIVRLAGTILHNPAKVSVTPVSSTVETIQQQVYFVDKGNKNRLLVHLLK
DQSIKTALVFTRTKHGADKVVKFLLKHDITAEAIHGNKGQNARQRALNNFKKQSTRVLVA
TDIAARGIDVDALAYVINFDMSNMAETYVHRIGRTGRAGAEGTAISFCDAEEKAYLCDVE
KLIAKKIPVIDRHPFPLTDLNPVKTVAPQGRGGSGRPGAKPSHKANSKRWSVNPRKAR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggattcagttcactcaatattatcgatccgattgcacgggcattacgcgaagaaggc
tatgctacgccgacacctatacaggccgaagctattcccgttattctggagggcagtgat
cttctcggctgcgcacagacggggacaggaaaaacggcggcattcgccattcctttgctg
caactgctcagtgagcgcaacacctacgagaaaaaaagaaaaatcagagctcttgtcgtg
acgccgaccagggaacttgccattcagataggcgaaagctttaaagcctacggccgtcat
accggccttacaaaccgggttattttcggcggggttaaccagaatcctcaggcagcgtca
ttgcgaaacggtgtcgacattgttgtcgcaacccccggccggctcctggaccttatggga
caggggcatctgcatcttcgtgatgtggaaatacttgttctggacgaggctgaccgaatg
ctcgatatgggctttattcacgatatccgaaaaattctcgcagctcttccggaaaagaaa
cagtcactctttttctcggccaccatgccgtctgaaatagtcaggttagccggtaccatt
ctgcacaatccggcaaaggtatcggttacgccggtttcgtcgacggtcgaaaccatacag
cagcaggtgtattttgtcgacaaaggcaataaaaaccgtcttctggttcacctgttaaag
gatcagagcataaaaaccgctctggtatttacccgcaccaaacatggtgccgacaaagtg
gtgaagtttctcctgaaacacgatatcaccgctgaagctattcacggcaacaaggggcag
aacgcacgccaacgggccttgaacaacttcaagaagcagtccaccagagtgctggtcgca
accgatatcgccgcacgcggtattgatgtcgatgcactggcatacgttatcaacttcgat
atgtcgaatatggcggaaacctatgttcaccgtatcggcagaacggggcgggccggtgcg
gaggggaccgcgatctctttttgcgatgctgaagagaaagcctatctctgtgacgtcgaa
aaactgattgccaagaaaattccggtcatcgatcgtcatccgtttccactgacagatctc
aatccggtcaagacagttgccccgcaggggcgagggggctcgggacgtccaggggcgaaa
ccgtctcacaaagccaattcgaagcgctggtcggtcaatccgcgcaaagcaaggtaa
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