Prosthecochloris aestuarii: Paes_2037
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Entry
Paes_2037 CDS
T00732
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paa
Prosthecochloris aestuarii
Pathway
paa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Paes_2037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paa03021
]
Paes_2037
03400 DNA repair and recombination proteins [BR:
paa03400
]
Paes_2037
Enzymes [BR:
paa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Paes_2037
Transcription machinery [BR:
paa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Paes_2037
DNA repair and recombination proteins [BR:
paa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Paes_2037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ACF47047
UniProt:
B4S5A1
LinkDB
All DBs
Position
complement(2233993..2234979)
Genome browser
AA seq
328 aa
AA seq
DB search
MIYQMQMPERIEVDEATHSESIGQFVAQPLERGYGVTLGNAMRRVLLASLPGTAITGIKI
DGVFHEFSTIDGVREDVPEIVLNLKKVRFKSTTKRSCKTSLSIEGPADFKAGDIVAQEGE
FEVLNKDMHIATLNGDAKLNIDIYIGRGRGYVPAEENRGEGMPIGFIAIDSIFTPIKNVK
FSVENTRVGQRTDYEKMILDVETDGSISPDDSISLAGKVINEHVSLFANFSPTEEEFAEE
EYKQQDDEFENMRKLLQTRIEDLDLSVRSHNCLRLAEIDTLGDLVSRKEDELLTYKNFGK
KSLTELKEQLDKCELKFGMDITKYQMKS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatataccagatgcagatgcctgagcgaatcgaggtggatgaggcaacacatagtgag
agtataggacagtttgtggctcagcctctggaaagaggatatggtgtaaccttaggtaat
gcaatgcgccgggtattgctggcatctctgccgggtacggctattaccggtataaaaata
gatggtgtttttcatgagttttcgacaattgacggcgttcgtgaagatgttccggaaatt
gtccttaacctgaaaaaggtgcgttttaaatcgacgacgaagcgaagctgtaaaaccagt
ctatccatcgaagggcctgctgattttaaagccggagatatcgtcgctcaggaaggtgag
tttgaagtcctcaacaaggacatgcatattgcaacccttaatggtgatgcaaaactcaat
atagatatttatatcggacgaggcagaggctatgttcctgctgaagaaaatcggggcgaa
ggtatgccgatcggctttatcgctatcgattcgatttttacaccgatcaagaatgtcaag
ttctctgtagaaaatacccgtgtcggtcagagaacagactatgagaaaatgattctcgac
gttgaaaccgatggttcgatttcccctgatgattcaatcagtcttgcaggaaaggtcatc
aacgagcatgtttctcttttcgccaatttttctcctacagaggaagagttcgccgaagaa
gagtacaagcagcaggatgacgagtttgaaaatatgcgaaaactccttcagaccagaatt
gaggatcttgatctttcggtccgatcacataactgtctgagacttgctgaaatagatact
ctgggtgacctggtttcccgtaaagaggacgaactgttgacatacaagaacttcgggaaa
aagtcgttgacagagcttaaagagcagttagacaaatgtgaattgaaatttggtatggat
attaccaagtatcagatgaagagctaa
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