Prosthecochloris aestuarii: Paes_2313
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Entry
Paes_2313 CDS
T00732
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paa
Prosthecochloris aestuarii
Pathway
paa03420
Nucleotide excision repair
paa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Paes_2313
03430 Mismatch repair
Paes_2313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paa03400
]
Paes_2313
Enzymes [BR:
paa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Paes_2313
DNA repair and recombination proteins [BR:
paa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Paes_2313
MMR (mismatch excision repair)
Other MMR factors
Paes_2313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
ACF47309
UniProt:
B4S6V4
LinkDB
All DBs
Position
complement(2488075..2491029)
Genome browser
AA seq
984 aa
AA seq
DB search
MPLFRDTYSAADLSLTDDQYNAVIDDTNEILCLACAGSGKSRTLSFRIARLIHEGAKPEN
IIAFTFTEKAAESIKRRVASALEKAGLPVALVGAMYIGTIHAFCQNLLGSMNAKYRQYEV
LNENRLRLFLLSRYYELELNALQANRNARMFQTIAEVSNAWKMANDEMLSLDEIEEEDAP
LGSCLKNINNRLNSDQYIDFSLMIRLVVEALEANNTEIYAALESANHLMVDEYQDVNISQ
ERLIRGLYSRLNSLFVVGDDDQSIYGWRGADVRNIIEFDQRYPNCSTHTLSTNFRSTNTI
VSTSDRFIQHQLSTARIDKAPISNSDGNIQHFGNLWFRTKQDEAEWIANRINQLLGTKYI
ETDGSERGLTKSDFAILMRSVQGGTRNGGAPYHRDYTNALSKADINYIIEAEGSIFERLH
ARTLRDAMSLLRSPGYPRREAINFFNSNILPVFPNADLNKFLEILADWNNQIHRPIGGAR
RKVYPQLLVHELLEAFRISTTEFQNHEQVMRDLGVFSGIILDVEKVFVSIDTGQRYQSML
NFLENVAESGYDTTQVELMSRPDAVTISTVHKMKGLEFPVVFIVDVVQQRFPGKRSSYNG
WLPLNLIQNPLSRGLYQSNIFGEARLFYTALTRAERFLYVTGSSIQPGLQRPKNPSPFKL
IIQGLNDPEVITDTTHLPDNIERIEQRPRIDEESMPTSFTEIKDYLECPMKYKFRKIYGY
SPAVPELFGYGLTTHTAINRAHQLFANAAPTREEAGEITEDVFHLKHVFPSRDPEREGPY
ERAKNASKRLVGNYAEGYPEDFVQSRSLEQRFEIKANNALITGSIDLLLREDNNGNILEA
RVIDFKSMDFPEGQLNPFFWINLSLQVQLYAYAADIVLGENAKTGSVHLLKALSTEEVPN
RVNVPITDEAIESAIQNIEWAVNRILEGEFPMRPSVGKCEECDFRKICSKQRQEFNSTVV
PNPIHIPETNGTTELRVRSFSDVE
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgccactatttagagacacttattccgctgctgatttatcattaactgatgatcaatat
aatgcagtcatagatgacacaaatgagattttatgtttggcttgtgcaggatctggaaaa
tcaagaactctttccttcagaatagcgagactaattcatgaaggcgctaaaccggagaat
ataattgcatttacctttaccgaaaaagccgctgaatctataaaaagacgtgttgcttct
gcccttgaaaaggccggactacctgtggctttagttggagcaatgtacataggaacaata
catgcattttgccaaaatcttttaggttcaatgaatgcaaagtataggcaatatgaagta
cttaatgagaaccggttgagattatttttattgtcaagatattatgaattagaattaaat
gccttacaagcaaatagaaatgcgaggatgttccaaaccatagctgaagtatctaatgct
tggaagatggcgaatgatgagatgttatctcttgatgaaattgaagaagaagatgctcca
ttgggctcttgcttaaaaaacataaataatcgattaaactctgaccaatacattgacttt
tcattaatgattcgattggttgttgaagcattagaagccaataatacagaaatatatgct
gcacttgaaagtgcaaatcatctaatggttgatgaatatcaagatgtcaatatatctcaa
gaacgattaattaggggtttatatagtcgcctgaactcattatttgtcgtaggtgacgat
gaccaatccatttatggttggagaggtgcagatgttagaaatataattgagtttgatcag
agatacccaaattgctcaacccataccctgtcaacaaactttcgaagtacaaataccatt
gtctctacatcggacagatttattcaacatcaactaagtactgcaaggattgataaagca
ccaatatcaaactcagatggtaatatacagcacttcggaaacctatggtttagaacaaag
caagatgaagctgagtggatagctaaccgaataaatcaattacttggaactaaatatata
gaaacggacggatcagaaagagggctcactaaatctgactttgcaatattgatgcgttca
gtacaaggaggcacacgaaatggtggagccccatatcatcgagactacacaaatgcgctt
tcaaaggctgacattaattatataatcgaagcagagggctctatttttgaaagacttcat
gcaaggactcttagagatgctatgagccttttaaggtctcctggatatcctcgaagagaa
gcaattaattttttcaactctaatattctaccagtattcccaaatgctgatttaaataaa
tttttagaaatcttggctgattggaataatcaaattcatagaccaattggcggagcaaga
agaaaggtataccctcaattattagttcatgaattattagaagcattcagaatttcaact
acagaatttcaaaatcatgaacaagtgatgcgtgatttaggagtttttagtgggattatt
ttggatgttgaaaaggtatttgtaagtattgatacaggtcagagataccaaagtatgtta
aatttcctcgaaaatgtagctgagtctggatatgatacaacccaagtagagctaatgtcg
agacctgatgctgttacaatttcgacagttcataaaatgaaagggcttgaattccctgtg
gtctttatcgtggatgttgttcaacaacgttttcccggtaagagaagtagttataatggc
tggttacctttaaaccttattcaaaatcctttatccagaggtttatatcaatcgaatatt
tttggcgaggcaagacttttttatacggctttaacacgtgctgaaagatttttatatgtt
acaggaagcagcattcaaccgggattgcaaaggcctaaaaacccaagtccgttcaaactt
ataattcaaggactgaatgaccctgaggtgataactgatacaacacatttacctgataat
attgagagaatagaacaacgccctcgcatagacgaagaatcaatgcctacaagttttaca
gaaattaaggactatttagagtgtccaatgaaatataaatttcgtaaaatttacggctac
agtcctgccgtacctgagttatttggttatggattaactactcatactgcaataaataga
gctcatcaactttttgcaaatgcggcaccaacacgagaagaagccggagaaattactgag
gatgtttttcatttaaagcatgtgtttccatcaagagatcccgagagagaaggaccctat
gaaagagccaaaaacgcctcaaaacgtttagtgggtaattatgcagaaggttatccagaa
gattttgtgcaaagccggtcattagagcagcgtttcgagataaaagctaacaatgcatta
attactggttcaatcgatttgctattacgagaggataataatgggaatattttagaggca
agagtaatagatttcaagtcaatggattttcctgagggacagttaaatccctttttctgg
ataaatctttctttacaagttcagctttatgcttatgcggcagacatagttttaggagag
aatgcgaaaacaggttcggttcatttattaaaagcactaagtacagaagaagtgccaaat
agagtaaatgttccgattacagatgaagctattgaatctgctattcagaatatagagtgg
gctgttaatcgaattcttgagggagagtttcctatgaggccgagcgttggtaaatgtgag
gaatgcgactttaggaaaatttgctcaaaacagagacaagagtttaattcgaccgtagtt
ccaaatccgatacatattccagaaactaatgggacgacagagctaagagttagaagtttt
agtgacgtagaatga
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