Paenimyroides aestuarii: NPX36_00565
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Entry
NPX36_00565 CDS
T09513
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
paae
Paenimyroides aestuarii
Pathway
paae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NPX36_00565 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paae03021
]
NPX36_00565 (rho)
03019 Messenger RNA biogenesis [BR:
paae03019
]
NPX36_00565 (rho)
Transcription machinery [BR:
paae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NPX36_00565 (rho)
Messenger RNA biogenesis [BR:
paae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NPX36_00565 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
SAP
NACHT
AAA_22
Fan1_SAP
AAA
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
UUV21585
UniProt:
A0ABY5NSR8
LinkDB
All DBs
Position
complement(122041..123705)
Genome browser
AA seq
554 aa
AA seq
DB search
MFDKNVLKGMKLPEIKEIAKTIGIAKTTLKKDELIDAILKMQETFQQEKPATENESMPEQ
AAHSKKEKRKRIHTTTDEAATEPTTQKAHNSSKKNVEKAVENTSDIPQQNNQHKNQKQRK
KAASTNEKQEQQPSSITTQDSAKENVQPEAPENEKQNNTQNRNKNQNQNQKKQNYRDPDY
EFEGIIECEGVLEVPKDGGSHGYLRSSDYNYRKSPDDIYISQSQIRLFGLKKGDTIKGIV
RPPKGNEQHFPLVRITKINGHEPDEVRDRPSFEHLTPLFPKEKFNLSGNNSKLSTRIIDL
FAPIGKGQRGMIVAQPKTGKTMMLKEIANAIADNHPEVYQIVLLIDERPEEVTDMQRNVR
AEVVASTFDEEARYHVELADMVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGRV
LSGGVDANALQKPKRFFGAARNIENGGSLTIIATALTDTGSKMDDVIFEEFKGTGNMELQ
LDRKIANKRIFPAVDLTSSSTRRDDLLQDRYTNSKMVVLRNILADMNPVEAITFIHDRIK
NTKSNDEFFDSMRD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaaaaacgtgttaaagggtatgaaattacccgaaataaaagaaatagcaaag
acaattggtatcgctaagaccactcttaaaaaagacgaattgattgatgctattttaaaa
atgcaagaaacttttcagcaagaaaagcctgctactgaaaatgaaagtatgccagaacag
gcagctcattcaaaaaaagaaaaacgaaaaagaatacatacaactacagacgaagctgca
acggaaccaactacacagaaggcacacaattcgtctaaaaaaaatgtggagaaagcagtt
gaaaatacaagcgatattccgcaacaaaacaatcagcataaaaatcaaaaacagcgcaaa
aaagcagcatcaaccaatgaaaagcaagagcaacagccttcatcaataactactcaagat
tctgcaaaagaaaatgtgcaaccagaagcgcccgaaaacgaaaaacagaataacacccaa
aaccgaaataaaaatcaaaaccagaatcagaaaaagcaaaattaccgcgaccctgattat
gaatttgaaggaattattgaatgcgaaggtgttcttgaagttccaaaagacggtggttcg
catggttatttgcgatcatcggactataattaccgcaagtcaccagacgatatttatatt
tcacaatcacaaattcgtttgtttggcttaaaaaaaggcgacactataaaaggaattgtg
cgtccgcccaaaggcaatgaacagcattttccgttggttcgtatcacaaaaatcaatggt
catgagccggatgaggttcgtgatcgtccttcttttgaacatttaacgcccctttttcct
aaagaaaaattcaatctatcagggaataactccaaactatctacccgcattattgattta
tttgccccaataggtaaagggcaacgcggtatgattgtagcacagcccaaaacgggtaaa
acaatgatgctaaaagaaattgccaatgccattgcagataaccatccagaagtctatcaa
attgttctattgatcgatgaacgccctgaagaggtaaccgatatgcagcgaaatgttcgt
gcagaagttgtagcttctacctttgacgaagaagcgcgctaccatgtagaattagctgat
atggtgttagaaaaagcaaaacgattggtagaatgtgggcacgatgtagtgattttactt
gattcaatcacccgtttggcacgtgcatacaataccgttcaaccagcctcgggaagagtg
ttgtcgggtggtgtagatgccaatgctttgcaaaaaccaaagcgcttttttggagcggca
cgaaatatagaaaatggtgggtcattaactataattgcaactgctttaaccgatacaggt
tctaaaatggacgatgtgatttttgaagaatttaagggaacaggtaatatggaattacag
ttagaccgtaaaattgcaaacaaacgcattttcccagcagttgatttaacgtcttcatca
acccgtcgagatgatttattacaagatcgatacaccaacagtaagatggttgttttgcgt
aatattctcgcggatatgaacccggtagaggcaattacgtttattcacgaccgcatcaaa
aacaccaaatcaaacgatgagttttttgacagcatgcgcgactaa
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