Paenimyroides aestuarii: NPX36_01930
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Entry
NPX36_01930 CDS
T09513
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
paae
Paenimyroides aestuarii
Pathway
paae02020
Two-component system
paae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NPX36_01930 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NPX36_01930 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paae03021
]
NPX36_01930 (rpoN)
Transcription machinery [BR:
paae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NPX36_01930 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
DUF3015
LacI
Motif
Other DBs
NCBI-ProteinID:
UUV21837
LinkDB
All DBs
Position
404135..405598
Genome browser
AA seq
487 aa
AA seq
DB search
MLKQNLQLKLSQKLSPQQIQLMKLIQLPTLAFEQRLKEELVENPALESGKEETNEADDFQ
DNSDEFDEFDNEHIDTDDINIDDYLSDDEIPDYKLKSNNYSDDDDDTFMPIEAQISFHQS
LIEQLNTFILTDEQRIIAEFLIGSMDDMGYIRRDIQDIVDDMAFTQGIYASEEQVQQILE
NIIHELEPSGVGARDLQECLSLQLQSKTPNESIDLAKDIIENQFEAFTKKHYDKLLQKYN
VTQSQLRKAIDEIEKLNPKPGGSFSGSSRAIEHIIPDFTVKVDDGEIELLLNSRNAPELH
VSKDYQEMLQTYKETNQKSSAQKDAVQFIKQKLDGAKWFIDAIKQRQETLFVTMSAIIEY
QKEYFLDGDETKIRPMILKDIADMVGLDISTISRVANSKYVDTPYGTKLIKEFFSEAMMN
DQGEEVSTIEIKKILQNIIEDEDKQKPLPDDKLAEMLKEKGYPIARRTVAKYREQLDIPV
ARMRKKI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcaaaacttacaattaaaattatcgcagaaattatcgccgcagcaaattcag
ttaatgaaactgattcaattgcccacgcttgcttttgaacaacgcttaaaagaagagttg
gtagaaaatcctgccttagaatcgggcaaagaagaaaccaacgaagccgatgattttcag
gataattcagatgaatttgatgaattcgacaatgagcatatcgacacagatgacatcaat
atcgatgattatttaagcgatgatgaaattcctgattataaattaaaaagcaataattac
agcgacgacgatgacgatacgttcatgcctatcgaagcacaaattagttttcatcaaagt
ttaattgagcaactaaacacgtttattttaaccgacgaacaacgaattattgccgagttc
ttgataggtagcatggacgatatgggctatattcgccgcgatattcaagatattgtagat
gatatggcattcacccaaggcatttacgccagtgaagaacaagtgcagcaaattcttgaa
aacattattcacgaattggaaccaagcggcgtgggtgcacgcgatttgcaagagtgttta
tcactacagttgcaaagcaaaacgcccaatgaatcgatcgatttggctaaagatattatt
gaaaatcaatttgaggctttcaccaaaaaacattacgataaattgttgcaaaaatacaat
gtaacccaatcgcaacttcgaaaagctattgatgaaattgaaaaattaaaccctaaacca
ggcggaagtttttcgggcagttcaagagcaattgaacatattattcccgattttaccgtg
aaggttgatgatggcgaaattgaactattgctcaacagccgaaatgctcccgaattgcac
gtttcaaaagactatcaggaaatgttgcaaacctataaagaaaccaatcaaaaatcaagc
gcacaaaaagatgctgtgcaattcattaaacaaaagttagacggtgccaaatggttcatc
gatgccattaaacaacgccaagaaaccctttttgtgaccatgagtgcgattattgaatat
caaaaagaatattttttagacggcgacgaaactaaaatacgtccgatgattttaaaagat
attgccgatatggtgggcttagacatttcaaccatttcgcgggttgccaacagcaaatat
gtggacacgccttatggcaccaaactgattaaagagtttttctctgaagcaatgatgaac
gatcaaggcgaagaagtttctaccatagaaattaaaaagattttgcaaaacattattgaa
gatgaagacaaacaaaaaccattgcccgatgataaattggcagaaatgttaaaagaaaaa
ggatacccaattgcccgccgaacggttgcaaaataccgcgaacagcttgatattccggta
gcccgtatgcgcaaaaaaatttaa
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