Paenimyroides aestuarii: NPX36_02270
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Entry
NPX36_02270 CDS
T09513
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paae
Paenimyroides aestuarii
Pathway
paae03030
DNA replication
paae03430
Mismatch repair
paae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPX36_02270 (dnaE)
03430 Mismatch repair
NPX36_02270 (dnaE)
03440 Homologous recombination
NPX36_02270 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paae03032
]
NPX36_02270 (dnaE)
03400 DNA repair and recombination proteins [BR:
paae03400
]
NPX36_02270 (dnaE)
Enzymes [BR:
paae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NPX36_02270 (dnaE)
DNA replication proteins [BR:
paae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NPX36_02270 (dnaE)
DNA repair and recombination proteins [BR:
paae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NPX36_02270 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
MCM10_OB
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
UUV21897
LinkDB
All DBs
Position
complement(475633..480159)
Genome browser
AA seq
1508 aa
AA seq
DB search
MYIIFDTETTGLPKDWNAPITDVDNWPRCIQIAWQLHDELGNLVAHEDYLIKPDGFDIPY
DSERIHGISTLLATEKGVDINTVLAKFNTALSKAKFVVGQNVGFDLNIMGAEFHRAAVQS
SLNNMPVLDTCTEVTADLLKISGGRGGRYKLPTLTELHEYLFGVPFGEAHNATADVEATT
RCFFELIRKNVFTESELQQPAGYLQHFKEVNPQPFQLIGLKHINLKKASEEIRKQLEAAG
VIKEEAKQVISTDVKKAYEAAVFAHLHNHTQFSVLQSTIDIGAMIKKAAKEKMSAVAMTD
HGNMMGAFKFVSAVLDHNKNAKKANEAAIENGEQPTESELKPIVGCEFFVCENHTDKSKK
DNGYQIVLLAKNKNGYHNLAKLSSIASINGFYYVPRIDKETLLKYKEDVIVLSGNLFGEI
PNKILNIGEKQAEEALLWWKEHFQDDFYLEIMRHNQEDEDRVNKTLIAFSQKHHVKLVAT
NNTYYLEKSDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYYKTQAEMKALFKDL
PEAIINIQEIVDKIEVYSLYRDILLPKFDIPAEFIHPEDAIDGGKRGENAYLRHLTYEGA
KRRYKEIDETITERLDFELKTVENSGYPGYFLIVQDFIAAARKMGVSVGPGRGSAAGSAV
AYCLGITNLDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGANQVAQI
ITYGKMATKSAIKDAARVLDLPLYESERIAKMIPTMMPSKWNLRRFLSEPEEDIKKVLRS
EEFDAVKELINVAKQNDLLSETIQQAKIIEGSMRNTGIHACGVIITPDDITNFVPVQTAK
DSELYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTIAIIKQRTGLEIDPEEIPIDDAKT
YELFQRGETVGVFQYESPGMQKYMRELKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGE
EEITYDLDACEEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQKDVLDKM
KPKFVEQAAAKGHDPKTLEKIWKDWEAFASYAFNKSHSTCYAWVAYQTAYLKAHYPAEYM
AAVLSNNMNDIKSVTFFMEECRRMGLDVLGPDVNESHYKFAVNENYQIRFGMGAIKGVGE
GAVNTIIENRKNGNYKSIFDLAKRIDLRSANKKAFENLALAGGFDCFSDTHRAQYFYTEG
DGITFLEKAMKYGAKFQENENSAQVSLFGESSEVQIPEPVIPSCEEWTTMEKLAKEKDVV
GIYISGHPLDDFKFELKYFCNVKLEQLKHLDLLVGRTVTFGGMISNVQFKTSSKGKDWAI
FTVEGYDESIEMRMFNEDYLKNRHFLLNNTFVYFKVYVKEGWIKKDTNERSEPRMQFVEL
KLLNEVIPTFAKKLIIQIDVRQLKEMQVEKIRFIMDQNPGSKAVVFEVFELEEVQNRLQT
EEINKLLPDVSDEETAELIEEKTTDIPLPEVQYLKKNLLEMPSKNMRIEISSDLLEELER
MQVSFRLN
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtatataatttttgataccgaaaccacaggtttaccaaaggattggaatgcacctatt
accgatgttgacaattggccgcgatgcatacaaattgcttggcagttgcatgatgaattg
gggaatctggtggcgcatgaagactatttgataaaacccgatggttttgacattccttat
gattcagaacgaattcatggtatttctactttattggcaaccgaaaaaggggtcgatata
aatacggttcttgcgaagtttaacacggctttgagcaaagccaaatttgttgtggggcaa
aatgtaggtttcgatttgaatataatgggtgccgaatttcacagggcagccgtgcaatcg
tctttaaacaatatgccggtgcttgatacgtgtaccgaagttacagccgatttgctgaaa
atttctggcggacgtggaggcagatacaaattacccactttaacagagttacacgaatat
ttgtttggagtgccttttggcgaagcacacaacgctactgccgatgtagaagctaccaca
cgatgtttttttgaattgattcgtaaaaacgttttcacagaaagtgaattgcagcaacca
gccggatatttacaacattttaaagaagtaaatccgcaaccttttcagttaatcggtcta
aaacatatcaacctaaaaaaagcatctgaagaaattcggaaacaattagaagcagcgggc
gttataaaagaagaagcgaagcaagtaatatctaccgatgttaaaaaagcttacgaagct
gctgtttttgcgcatttgcacaatcacacacagttttcggtcttgcaatctacgattgat
attggtgcaatgattaaaaaagctgccaaagaaaaaatgtctgccgtggcaatgaccgat
cacggaaacatgatgggtgcttttaagtttgtaagtgcggttttagatcacaacaaaaat
gcaaaaaaagccaatgaagcagcgattgaaaacggtgagcaacctactgaatcggaacta
aaacctattgttggttgcgagttttttgtgtgcgaaaatcataccgataaatctaaaaaa
gataacggatatcaaatcgtattgttggcaaaaaataaaaacggataccacaatcttgcg
aaattatcatcaattgcatcgataaatgggttttattatgtgcctcgtatcgataaagaa
acattattaaaatataaggaagatgtaatcgtgctttctggtaatttgtttggtgaaatt
cccaataaaattttaaacattggtgaaaagcaagccgaagaagccctgttatggtggaaa
gaacattttcaagatgatttttatttggaaatcatgcgccacaaccaagaagatgaagac
cgtgtaaacaaaacattgattgctttctcacaaaagcaccacgtgaaattagtggcgacg
aacaatacctattatttagaaaaatccgatgccaatgcccacgatattcttttgtgtgta
aaagacggcgaaaaacaagcaacaccaattggacgcggacgcggataccgctacggctta
ccgaaccaagaatattattataaaactcaagcggaaatgaaggcgctttttaaagatttg
cctgaagccatcattaatattcaagaaattgtagataagattgaagtatattcgttgtat
cgagatattttattgccaaaatttgatattcctgctgaatttatccacccagaagatgcg
attgatggaggaaaacgaggtgaaaatgcgtatttacgccatttaacctatgaaggagcc
aaacgccgatacaaagaaattgacgaaacaattaccgaacgcttagattttgaactaaaa
acagttgaaaattcaggttatccgggttattttttaattgtgcaagatttcattgcggca
gcccgaaaaatgggtgtgtcggttggtccggggcgtggttctgctgcgggttcggcggtg
gcctattgtttgggaatcaccaatttagatcctattaaatatgatttgctttttgagcgt
tttttgaatccagaccgtgtgtcgatgcccgatattgatatcgatttcgatgatgaaggg
cgtgggcgtgttatggattatgtaatcaacaaatacggtgcaaatcaggtggcacaaatc
attacttatggtaaaatggcaactaaatcggctattaaagatgcggcgcgtgtgttggat
ttgcctttgtacgaatcggaacgtatcgccaaaatgatacctaccatgatgccgagtaaa
tggaatttgcgtcgttttttatcagaaccagaggaagatatcaaaaaagtattgcgttcg
gaagagtttgatgcggtgaaagaattaatcaacgttgccaaacaaaacgatttgctttcg
gaaaccattcagcaggcaaaaatcattgaaggttctatgcgaaacaccggaattcatgct
tgtggagtaatcattacgcccgatgatattaccaatttcgtgcctgtgcaaacggcaaaa
gattctgaattgtatgtaacccaatttgataactcggttgccgagagtgctggtttgctc
aagatggatttcttgggtttaaaaacccttacattaataaaagataccattgcgattatc
aagcagcgtaccggtttagaaatagatccggaagaaattccgattgatgatgcgaaaacc
tatgaattgttccaacgcggagaaaccgtaggtgtgtttcaatacgaatctccgggaatg
caaaaatacatgcgcgagctgaaacctacggtttttggtgatttaattgccatgaatgct
ttgtatcgccccggaccgttggaatatattccatcgtttgttcgaagaaaaaatggtgag
gaagaaattacctacgatttagatgcctgcgaagaatacttaaaagaaacctacggaatc
actgtttatcaggaacaggtaatgcttttgtcgcaaaaattagccgattttactaaaggt
gaagccgatgtattgcgtaaggcaatgggtaaaaaacaaaaagatgttttggataaaatg
aaacctaaatttgtagaacaagcagctgcaaaaggacatgaccctaaaacattagaaaaa
atctggaaagattgggaagcttttgcttcgtatgctttcaacaagtcacactctacttgt
tatgcgtgggtggcttatcaaaccgcttatttaaaagcacattacccagcagaatatatg
gctgctgtgctttcaaacaatatgaacgatattaaatcggttacgtttttcatggaagaa
tgccgccgcatggggttagacgtgttaggacctgatgtaaatgagtcgcactacaaattt
gccgtaaacgagaattatcaaattcgctttggaatgggtgctattaaaggagttggcgaa
ggtgctgtaaacaccattatcgagaatagaaaaaacggaaattataaatcgatttttgat
ttggcaaaacgcatcgatttaagatcagccaataaaaaagccttcgaaaatctggcatta
gccggtggttttgattgtttttcagatacgcatcgtgcacaatatttttataccgaaggc
gatggaattacctttttagagaaagcaatgaaatacggagctaaatttcaagaaaatgaa
aactctgcccaagtgagtttgtttggagaaagcagcgaagtacagattcccgagcctgta
attccaagttgcgaagaatggacaacgatggaaaaattggcaaaagaaaaagatgtagtg
ggtatttacatttcggggcatccgttagatgattttaagtttgaactgaaatatttctgc
aatgtaaaattagagcagttaaaacatttagatcttttggtgggcagaaccgtaactttt
ggcggaatgatttcaaatgtgcaattcaaaacctcttcaaaaggaaaagattgggcgatt
tttacggtagaaggatatgatgaaagcattgaaatgcgcatgtttaatgaagattatctg
aaaaaccgtcactttttgttgaacaacacttttgtgtattttaaagtgtatgtgaaagaa
ggctggattaagaaagataccaacgaacgttcagaaccgcgcatgcagtttgttgagcta
aagttgttaaacgaagtaattccaacatttgcaaaaaaattaattattcaaatcgatgtt
cgccaattaaaagaaatgcaagttgaaaaaattcgttttataatggatcaaaatccaggt
tcaaaagcagttgtttttgaagtttttgaattggaagaagtgcaaaatcgtttgcaaacc
gaagagatcaacaaattattgcccgatgtgtcagacgaagaaacggcagagctcattgaa
gaaaaaaccaccgatattccattgcccgaggtgcagtatttgaaaaaaaatctattagaa
atgcccagcaaaaatatgcgtatagaaatttcatctgatttgttggaagaattagagcgt
atgcaggtttcctttagattgaattaa
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