Paenimyroides aestuarii: NPX36_02615
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Entry
NPX36_02615 CDS
T09513
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paae
Paenimyroides aestuarii
Pathway
paae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NPX36_02615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paae03019
]
NPX36_02615
03016 Transfer RNA biogenesis [BR:
paae03016
]
NPX36_02615
Enzymes [BR:
paae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NPX36_02615
Messenger RNA biogenesis [BR:
paae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NPX36_02615
Transfer RNA biogenesis [BR:
paae03016
]
Prokaryotic type
tRNA degradation factors
NPX36_02615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
Motif
Other DBs
NCBI-ProteinID:
UUV21954
LinkDB
All DBs
Position
543451..545682
Genome browser
AA seq
743 aa
AA seq
DB search
MIPKVTQEIIDLGDGRTITIETGKLAKQADGSVVVRSGNCMILATAVSAKTANPGVDFLP
LTVDYREKFSAAGRFPGGFFKREARPSDQEVLTMRLVDRCLRPLFPDDYHAETQIMLQLM
SFDENVMPDAMAGLAASAALAVSDIPFYNLISEVRVGRVNGELIINPSKQQLDESDLDMM
IGASKDSVCMVEGEMKEISEAEMIEAIKFAHEAIKVQIEAQERMRAALNLSYRTYEPEEN
DDTLKNEIHSFTYDKFYAIAAEASAKHERSEKFAALKEELLATFSEETLEEKKELISKYF
SKAQKEAVRNLVLDQGQRLDGRKTTEIRNIWSEVDYLPSAHGSSVFTRGETQALATVTLG
TSREANVIDLPSEQGEERFYLHYNFPPFSTGEAKPLRGVSRREVGHGNLAQRALKNMIPA
DCPYTIRLVSDVLESNGSSSMATVCAGTLALMDAGIQIEKPVSGIAMGLITDGNRFAVLS
DILGDEDHLGDMDFKVTGTKDGITACQMDIKIDGLRYDIMEQALQQAHEGRMHILNKLTE
TIAAPNATVKAHAPKIITRTIPGAYIGALIGPGGKVIQELQKATSTTIVINEVDEQGIVE
ILGTDADGIAAVLAKIDAIIFKPQVGEAYEVKVIKMLEFGAVVEYTAAPGNEVLLHVSEL
AWERTENVTDVVNMGDVFQVKYLGIDPKTRKEKVSRKALLPRPPKPEGKPEHKGEGKSDN
RENRPAHRNNNNRPSNDKKEKNN
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgattcctaaagtaacccaagaaattatcgatttaggcgatggaagaaccatcactatc
gaaactggcaaattagccaaacaagcagacggttctgttgtagttcgttcaggaaactgt
atgattttagctactgcagtttctgcaaaaacagcaaacccaggtgtagattttttacca
ttaacagtagattatcgtgaaaaattttcggctgcaggtcgtttcccaggtggattcttt
aaaagagaagcacgcccaagcgatcaagaagttttaaccatgcgtttggtggatcgttgt
ttacgacctttgtttccggatgattatcatgcagaaacccaaatcatgctacaacttatg
tcgtttgatgaaaacgtgatgcccgatgcaatggcaggtttggcagcttcggcagcattg
gctgtttcagacattcctttttacaaccttatttctgaggtgcgtgtggggcgtgtaaac
ggcgaattaatcatcaacccaagcaaacaacaattagacgagtcagaccttgacatgatg
attggagcttcaaaagattctgtttgtatggtggaaggtgaaatgaaagaaatttcggaa
gctgaaatgatcgaagcaattaaatttgcacacgaagcaattaaagtgcaaatcgaagcg
caagaaagaatgcgtgcagctttgaatttatcatacagaacctacgagcctgaggaaaac
gatgacacgctgaaaaacgaaattcactcgtttacctacgataaattttatgcaattgca
gcagaagcaagtgcaaaacacgaacgcagcgagaagtttgctgctttaaaagaagaatta
ttagctactttttctgaagaaactctagaagaaaagaaagaattaatttctaaatatttc
tctaaagcccaaaaagaagcagttcgcaatttggttttagaccaaggacagcgtttagac
ggtcgtaaaaccacagaaatccgtaacatttggagcgaagtagattatttaccatcagcg
cacggttcatcagtatttacacgcggtgaaacccaagcattggctactgtaacattagga
acatcgcgcgaggcaaacgttatcgacttaccaagtgagcaaggcgaagaacgtttctac
ttgcactataacttccctccattttcaacaggtgaagcaaaaccattgcgtggtgtgtca
cgccgcgaagtaggtcacggaaacttggcgcaacgcgcattgaaaaacatgattccagca
gattgtccttataccattcgtttggtttctgatgtattagaatcaaacggttcatcgtct
atggcaactgtttgtgcaggaacattggctttgatggatgcaggtattcaaattgaaaaa
ccggtatcgggtatcgcaatgggattgattacagacggaaatcgttttgctgtattatct
gatattttgggcgatgaagatcacttaggtgatatggattttaaagtaactggtactaaa
gatggtatcacagcttgccaaatggatattaaaatcgatggtttgcgttacgatatcatg
gagcaagcattgcagcaagcacatgaaggacgtatgcacattttgaataaacttacagaa
accattgcagcaccaaacgcaacagtgaaagcacatgcaccaaaaattattacaagaacc
attcctggtgcttatattggcgcattgattggtccgggcggaaaagtgatccaagaatta
caaaaagctacctcaacaaccattgtaattaacgaagtggacgagcaaggaattgtagaa
attcttggaacagatgcagacggaattgcagcagtgttggcaaaaatcgacgcgattatc
tttaaaccacaagtgggagaagcgtatgaagtgaaagtaattaaaatgttagaattcgga
gcagttgttgaatatacagcagcaccaggaaatgaagttttattacacgtatctgaattg
gcttgggaacgcactgaaaacgttaccgacgtggtaaacatgggcgatgtattccaagtg
aagtatttaggtatagaccctaaaacaagaaaagaaaaagtatcgcgcaaggcattgtta
ccacgccctccaaaaccagaaggcaaaccagaacataaaggcgaaggcaagtctgacaac
agagaaaacagaccagcgcacagaaacaataacaacagaccttctaacgacaagaaagaa
aaaaacaactag
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