Paenimyroides aestuarii: NPX36_03135
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Entry
NPX36_03135 CDS
T09513
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paae
Paenimyroides aestuarii
Pathway
paae03030
DNA replication
paae03410
Base excision repair
paae03420
Nucleotide excision repair
paae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPX36_03135 (polA)
03410 Base excision repair
NPX36_03135 (polA)
03420 Nucleotide excision repair
NPX36_03135 (polA)
03440 Homologous recombination
NPX36_03135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paae03032
]
NPX36_03135 (polA)
03400 DNA repair and recombination proteins [BR:
paae03400
]
NPX36_03135 (polA)
Enzymes [BR:
paae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NPX36_03135 (polA)
DNA replication proteins [BR:
paae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NPX36_03135 (polA)
DNA repair and recombination proteins [BR:
paae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NPX36_03135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NPX36_03135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
RNase_H_2
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UUV22054
LinkDB
All DBs
Position
complement(639937..642750)
Genome browser
AA seq
937 aa
AA seq
DB search
MSEKRLFLLDAYALIFRGYYAFIKNPRINSKGLDTSAVMGFMNSLMDVIKRERPNYLAVA
FDKDGSQARCEIFPEYKANRDETPEAIKIAVPYIQEILKAMHIPIIEVPGIEADDLIGTL
SKKAEKEGFQVFMVTPDKDYAQLVSENIFMYRPARMGNGIEIWGVKEVQEKFEVEHPLQV
IDFLGMMGDAVDNIPGLPGVGEKTAKKLLAEFGSMENLLENTDKLKGKMREKIEANKELG
LLSKKLARIFLDCPVEFDETFFKLDKPDVEKTDAIFQELEFRRMKEQFDKIFADDATMVQ
PTPIGKQPEKTSDQFSLFETGDSEIKIDQEGYYKNLATTDHHYQIIQGKFALQLFTKTLL
EQTEVCFDTETTNLDANLAELVGMSFAYTKGSAYYLPFPENQAEAQELIEILRPFFENEQ
IVKIGQNLKYDIKVLKNYNVEVKGFLFDTMIAHYLINPDMRHNMDVLAETYLQYQPKSIE
ELIGKKGKGQQSMRDVALEDIKEYAAEDADITYQLKEVFAPRLDQSKTRELFDKIESPLV
SVLAEMESEGIRLDVDYLKKLSVDLSAEAASLQTKIFETAGEEFNLASPKQLGVVLFEKL
KISNGKIKKTKTGQYATGEEVLSELAKDNEVVRDILEWRQIVKLQNTYVDALPHQINPKT
GRVHTDYMQAVAATGRLSSNNPNLQNIPIRTQRGQNVRKAFVARDENHVLVSADYSQIEL
RIIAALSEEPNMIESFKKQEDIHKATAAKVFNVALDEVTREQRSNAKTVNFGIIYGVSAF
GLSQQTSLSRAESKELIDAYYQTYPKLRDYIDNQIAFARENGYVQTVLGRRRYLKDINSQ
NAVVRGGAERNAVNAPIQGSAADIIKIAMINIHNRLLKENLQTRMLLQVHDELVFDVPKT
ELETIKPIIKEEMENAFVFAVPLEVEIGEGSNWLDAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaacgattatttcttttagatgcctacgcattgatatttcgtgggtattat
gcctttataaaaaatccacgtatcaattccaaagggttagatacctcggcagttatgggt
tttatgaattcattgatggacgttataaagcgcgaacgccccaattatttggcagttgct
tttgataaggatggaagccaagctcgttgcgagatttttccggaatacaaagcaaaccgt
gatgaaacccccgaagccattaaaattgcagtgccttacatccaagaaattttaaaagca
atgcacattcccattatcgaagtgcccggaattgaagccgacgatttaataggaacctta
tctaaaaaagccgagaaagaaggttttcaggtttttatggtaacgcccgataaagactat
gcgcagctggtttcggaaaatatttttatgtaccgcccggcacgcatgggcaatggaatt
gaaatttggggcgtgaaggaagttcaagagaagtttgaagtggaacaccctttgcaagta
atcgattttttgggaatgatgggcgatgcggttgataatattcccggattgccaggcgtt
ggcgaaaaaacagctaagaaattgttggctgaatttggttccatggaaaatttgttggaa
aataccgacaaattaaagggtaaaatgcgcgaaaagatcgaagcaaataaagagctcggc
ttgctttctaagaagttagcccgtatttttttagattgtccggtagaatttgatgaaaca
ttttttaagctagataaacctgacgtagagaaaaccgatgcaatttttcaggaattagag
ttccgaagaatgaaagaacagttcgataaaatctttgcagatgatgcaacaatggttcag
cccaccccaattggcaagcaacccgaaaaaacatccgatcaattttctttatttgaaaca
ggcgacagcgaaattaaaattgatcaagaaggatattacaaaaatttagcaacaaccgat
catcattaccaaataatacaaggtaaattcgctttgcaactcttcacaaaaaccttgttg
gaacagaccgaagtgtgttttgataccgaaacaaccaatttagatgcaaatttagccgaa
ttggtcggcatgtcgtttgcatacaccaaaggatcggcttactatcttccgtttcctgaa
aatcaagccgaagcacaagagttaatcgaaatactgcgaccgttttttgaaaacgaacaa
attgtaaaaattggtcaaaatttaaaatacgatattaaagtacttaaaaattataatgtt
gaagtaaaaggatttttgtttgataccatgattgcgcattatttgataaatccagatatg
cgtcataatatggatgttttggctgaaacctatctgcagtatcaacctaaatcgatcgaa
gaattaatcggtaaaaaaggtaaaggacagcaatcaatgcgcgatgtagctttagaagat
attaaagaatatgccgccgaagacgctgatatcacctatcaattaaaagaggtttttgct
cctagattggatcaatccaaaacccgtgaattgtttgataaaatcgaaagtccgttggtt
tctgttttagctgaaatggaatccgaaggtattcgattggatgtggattatctaaaaaag
ttgtcggttgatttatctgcagaagccgcatcacttcaaaccaaaatatttgaaactgcc
ggcgaggaattcaatctggcatcgcccaaacagttaggtgttgttttatttgaaaaatta
aaaataagcaatggcaagataaagaaaaccaaaacgggacaatatgccacaggagaagag
gttttgagtgaattagcaaaagacaacgaagtggttcgggatattttagaatggcgacaa
attgttaaattacaaaacacatatgttgatgccttgccccatcagatcaatccaaaaaca
ggtcgtgtgcataccgattatatgcaggcggttgcagctactgggcgtttaagttcaaac
aatcccaatttgcaaaatatcccaattcgcacccagcgcgggcaaaatgttcgaaaggca
tttgtagcacgagatgaaaatcacgtgttggtatctgccgattattcgcaaattgaattg
cgcatcattgctgctttgagtgaagaaccaaacatgattgaatcgttcaaaaagcaagaa
gatattcataaggcaaccgctgcaaaagtttttaatgtagctttagatgaggttacacgt
gagcaacgaagcaatgccaaaacggtgaactttggaattatctacggtgtttcggctttt
ggactgagtcagcaaaccagtttaagtcgtgccgaaagtaaagagttgatagatgcttat
taccaaacttatcccaaattgcgcgattatattgataatcaaatcgcttttgcaagagaa
aatggttatgtacaaacggttttaggtcgtcgcagatatttaaaagacatcaactcgcaa
aacgcagtggttcgtggcggggcagaacgcaatgcggtaaatgcgccaatacaaggatcg
gcagccgacatcattaaaattgcgatgatcaacattcataaccgattgctaaaagaaaat
ttgcaaaccagaatgttgctgcaagtacacgatgaattggttttcgatgttcccaaaacc
gaattagagacgataaaaccaataattaaagaagaaatggaaaatgcttttgtgtttgct
gttccgttagaagtagaaataggtgaaggatccaattggttggatgcacattaa
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