Paenimyroides aestuarii: NPX36_05255
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Entry
NPX36_05255 CDS
T09513
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
paae
Paenimyroides aestuarii
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paae03400
]
NPX36_05255 (sbcD)
DNA repair and recombination proteins [BR:
paae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NPX36_05255 (sbcD)
Archaeal homologous recombinant proteins
NPX36_05255 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
DUF1391
UBA_7
Motif
Other DBs
NCBI-ProteinID:
UUV22448
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All DBs
Position
complement(1106839..1108044)
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AA seq
401 aa
AA seq
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MKVLHTADWHLGKRLDGFSRFEEQIEVMNEIVEIANREKVDLVLIAGDLFDAFNPAVDAV
DLFYKTLKQLTNNAKRPVIAIAGNHDSPDRINAPDPLARECGIILLGYPNEKVNLFELDH
FKITKSVEGFIELKINHIEFPIRIIHTPYANEMRLKQYFGEEKEAQLNLVLKEQWTKIAD
EFCDEKGVNLLLSHLYMNKRGTALLEEPEGEKPIKIGNADMVFSDCVPPQIQYTALGHLH
AFNNIGTSEKPIVYASSPLCYSFSEAGQTKYVSIINAKPNQDINFTKVTLTKGKALIRKT
FQLVDDAINWLLKHPDTLVELTMETDTFLTTDERKAIFQAHSGIVHLIPRVKNVDIDAIS
AKEINLNQDIKGLFKDYFKSKNAQQEPNQELMDLFNEILNE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattgcacaccgccgattggcatttaggaaagcgtttagatggtttttcgcga
tttgaagaacaaattgaagtaatgaacgaaatcgtggaaattgctaatcgcgaaaaggtg
gatttagttttaattgctggtgatttgttcgacgcttttaacccagcggttgatgcggtt
gatttgttctacaaaaccctgaaacaacttacaaataatgcaaaacgcccagtaattgcc
attgccggcaatcacgattcgcccgacagaatcaatgctcctgatccattggcacgcgaa
tgtggaattatattgctgggttatccaaacgaaaaggtcaatttgtttgaattggatcat
tttaaaatcacaaaatctgtagaaggatttattgaactaaaaataaatcatatcgaattt
cccattcgaattattcatacgccgtatgccaacgaaatgcgcttaaaacaatatttcggg
gaagaaaaagaagcgcaattaaacctcgttttaaaagagcaatggacaaaaattgccgat
gaattttgtgatgaaaaaggcgtaaacctgctgctttcgcatttatacatgaacaagcgc
ggcactgcccttttggaagaacctgaaggcgaaaaacccataaaaataggcaatgcagat
atggtgttttctgattgtgttccgcctcaaattcaatatacggctttgggtcatttacac
gcatttaacaatattggcacttccgaaaaaccgattgtgtatgcctcatccccgctttgc
tacagttttagcgaagctggtcaaaccaaatatgtatccatcataaacgcaaaacccaat
caagatataaattttacgaaagttactcttacaaaaggaaaagcattgattcgaaagact
tttcaattggttgatgatgctataaattggctattgaaacacccagatacattggtagag
ttgaccatggaaaccgatacttttttaacaaccgatgaacgaaaagcgatatttcaggca
cattcgggcattgtacatttaattccaagggtcaaaaatgtggatattgatgcaatttca
gcaaaagaaatcaaccttaatcaagatataaaagggttgtttaaagattattttaagtcg
aaaaatgcccaacaagaacccaaccaggaattaatggatttgtttaacgaaattttaaat
gaataa
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