KEGG   Paenimyroides aestuarii: NPX36_08410
Entry
NPX36_08410       CDS       T09513                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
paae  Paenimyroides aestuarii
Brite
KEGG Orthology (KO) [BR:paae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paae03400]
    NPX36_08410
Enzymes [BR:paae01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NPX36_08410
    5.6.2.6  RNA 3'-5' helicase
     NPX36_08410
DNA repair and recombination proteins [BR:paae03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NPX36_08410
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Ubiquitin_USP47_N Cas3-like_C_2 PTS_IIB
Other DBs
NCBI-ProteinID: UUV20389
UniProt: A0ABY5NPG0
LinkDB
Position
complement(1752108..1754561)
AA seq 817 aa
MKNVNTTEGYQIITDWMHRNQQTPFEFQERTWNYYHKGYSGLVIAPTGFGKTFSVFLAAA
IDFMNRYDGTKTGLKLIWVTPIRSLAKDLARAMQHAADEIGLDWQVEVRNGDTDPKQKAK
QTKQMPDVLIVTPESLHLLLAQKSRNQFFKNVACIAVDEWHELLGNKRGVMVELAIAYLK
STLPALKIWGITATIGNIDQAMDVLLPHFPQKIKIISKEKKQIKIVPIYPDHVDVLPWAG
HLGSKLTNKVVQLVLKSRSTLIFTNTRSQSELWYQLLLDAHPDFAGQIALHHGSIDHHLR
KWIEESLSNGQLKAVVCTSSLDLGVDFKPVDTVVQIGSSKGIARFLQRAGRSGHSPFETS
TIYFVPTHSLELLEVAALKDAFKNKIIEKREPLVLTYDVLIQFLVTLALGGGFYPEETFS
IIKNTHAFHFISEEDWLWCLAFITKGGKLGEHYEEFHRVSVADDGKYVITKRRIGMLHRL
NIGVIVSDAMLRVKYVSGGYIGMVEEYFLTKLKVGDKFILAGRVLEYVRMKELTVFVRNA
SGKAITPSWLGGRLPLSADLGSFLRKKIAEAAKSESKAKEVAFLGPLLQYQKTYSTLPTE
KEFLVESIHTREGYHLFMYPLEGRFVHEVMATVIAYRISKRFPISFSIAMNDFGFELFSD
QPIPINEELLQELLSSNGLMDDVLGSINAAEMALHKFRDIAVIAGLVIQTFPGAQRNNKS
LQASSGIIFKVLEENEPTHLLVKQAYTEVFNQQLEEVRLQKTFQRIAESTVLLQFSDRYT
PLSFPIKADSLRQSLSSEDLATRLERMIERNLKKKKK
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgaaaaacgtaaataccaccgaaggttaccaaattattaccgattggatgcaccgcaac
caacaaacaccctttgagtttcaagaacgcacttggaattactaccacaaaggatacagc
ggtttggtaattgcccccacaggttttggtaaaacattttcggtgtttttggctgctgcc
atagattttatgaatcgatatgatggtacaaaaaccggtttaaaacttatttgggtaact
cccattcgctcattagcaaaagatttagcaagggctatgcaacatgccgctgatgaaatt
ggcctcgattggcaggttgaagtgcgcaatggcgacaccgatcccaaacaaaaagcaaaa
caaaccaagcaaatgcccgatgtgctcattgtgacacccgaaagtttgcatttactttta
gcgcaaaaaagtcgcaatcaattttttaaaaatgtagcctgcattgctgttgatgaatgg
cacgaattgctgggaaacaagcgcggcgttatggttgaacttgctattgcatatcttaaa
agtacacttcccgcactaaaaatttggggaattacagccaccattggcaatatagatcag
gcaatggatgtattgctgcctcattttccccaaaaaataaaaattatatcgaaagaaaaa
aagcagataaaaatagtgcctatttatccagatcatgtggacgttttgccatgggctggt
catcttggtagtaaactaaccaacaaagtggtacaacttgttttaaaaagtagatccacc
cttatttttaccaacacccgcagccaaagtgagctttggtatcaattgttattggatgcg
caccccgattttgctggtcaaattgcgcttcatcatggttccatagatcatcatcttcgt
aaatggattgaagaatcgctaagcaacgggcaattaaaagcagttgtttgcacctcatca
ctcgatttaggggttgattttaaacctgttgacaccgtggttcaaataggatctagcaaa
ggtattgcccggtttcttcaaagagcaggcagaagtggtcattctccctttgaaacatct
accatttattttgttcctacccattctttggaactgcttgaagttgctgctctcaaagat
gcttttaaaaataaaatcatcgagaaacgagaacctttggttttaacatacgatgtgctg
attcagtttttagtaaccttggctttgggtggcggtttttatccagaagaaacattttca
atcattaaaaacacccacgcttttcattttatctctgaagaagattggttgtggtgcttg
gcttttatcacaaaaggcggtaaattgggcgaacattacgaggaatttcacagggtgtct
gttgccgatgacgggaaatatgtgattaccaaaagaagaattggcatgctgcaccgccta
aatattggtgtgattgtgagcgatgccatgcttcgagtaaaatatgtttcgggcggatat
atcggaatggtagaagaatattttctcactaaattaaaagtaggagataaatttatatta
gcaggaagggttttggaatatgttcgcatgaaagaacttacggtttttgtacgcaacgca
tcaggaaaagccatcacgcccagttggttaggtggcagattgcctttaagtgccgattta
ggatcatttttgcgaaaaaaaatagccgaagcagcaaaaagcgaatcaaaagcgaaagaa
gttgcttttttaggtcctttgttgcagtatcaaaaaacctattccacattgcccactgaa
aaagaatttctagtagaaagcattcatacacgagaggggtatcatttgtttatgtatcct
ttagagggaagatttgtgcacgaagtgatggctactgtaattgcttatcgtataagtaaa
cgtttcccgattagtttttccatcgcaatgaacgattttggttttgagttgttttcagac
caacccattcctattaatgaagaattattgcaagaacttttaagcagtaacggattgatg
gatgatgtgttgggaagcatcaatgcagctgaaatggcgctgcacaagttcagagacatt
gccgtgattgcaggtttggtgatacaaacttttccgggtgctcaacgaaacaacaaatcg
cttcaggcatcatcgggaattatttttaaagttttagaagaaaacgagcctactcattta
ttggtaaaacaagcatacactgaagttttcaatcaacaattagaagaagtgcggctgcaa
aaaacctttcaaagaattgctgaaagcaccgtgttattacaattttcagaccgatacaca
ccattaagttttccaattaaagcagatagtttaaggcaatcgctatcaagtgaagattta
gcaacccgtttggaacgaatgattgaacgaaatttaaagaaaaaaaagaaatga

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