Paenimyroides aestuarii: NPX36_09465
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Entry
NPX36_09465 CDS
T09513
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paae
Paenimyroides aestuarii
Brite
KEGG Orthology (KO) [BR:
paae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paae03032
]
NPX36_09465
03400 DNA repair and recombination proteins [BR:
paae03400
]
NPX36_09465
Enzymes [BR:
paae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NPX36_09465
DNA replication proteins [BR:
paae03032
]
Prokaryotic type
DNA Topoisomerases
NPX36_09465
DNA repair and recombination proteins [BR:
paae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NPX36_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ADAMTS_spacer1
Motif
Other DBs
NCBI-ProteinID:
UUV20581
LinkDB
All DBs
Position
complement(1967844..1968827)
Genome browser
AA seq
327 aa
AA seq
DB search
MYLRKKHGKGFRYLNSKGETVTDTALKNYFKSLVIPPAWTEVEIAEKKKSKILVTGRDLQ
GRKQYIYNPQFRQKQEQKKFDRIIDFAEQLEHMRRVTGQHLRKRKPTREKVLATMVRLLE
SAFFRPGSDTYTKQNQSYGLTTLRSKHLTINGNELVFTYRGKSGKDQEKHIVDAKLAKIV
QEVDDLPGYEIFKFIDENGAVQDVKSEHLNQYIHEVMGDAFSAKDFRTWSGTMIAAIALD
ELNAEEPLDQKTMDKNIRKAVIQVSEKLGNTPAVARSSYIDPRVIDKYLDGKTLRYFQKE
INKMLQTSENLSNSELGVLCLLRERLK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttcgaaaaaaacatggaaagggttttcgttaccttaattcaaagggagaaacc
gttaccgataccgcactgaaaaactactttaaatcattggttatcccaccggcgtggact
gaagtagaaattgcagaaaagaaaaaaagcaaaattttagttactgggcgtgatcttcaa
ggccgaaaacaatacatctacaacccgcaattccgacaaaaacaagaacagaaaaaattt
gaccgaattattgattttgccgagcaactggagcacatgcgccgggttaccggacaacat
cttcgcaaaagaaaacccacacgcgaaaaggtgcttgccactatggtgcgtttgctagaa
tctgcttttttccgacctggaagcgatacctataccaaacaaaatcaatcgtatggatta
accacgttacgcagtaaacatttgacaattaatggcaacgagctggtttttacttatcgg
ggcaaatcgggcaaagaccaagagaagcatattgtggacgctaagttggccaaaatagtg
caggaagtagatgacttgcccggctatgaaatttttaaatttatcgatgaaaacggtgct
gttcaagatgtgaaaagcgagcatttaaaccaatacattcacgaagtaatgggcgatgct
ttttctgcaaaggatttcagaacgtggtcaggtaccatgattgctgctattgcattggac
gaactgaatgccgaagaacctttggatcaaaaaacgatggataaaaacattcggaaggca
gtgattcaagtgagtgaaaaattaggaaatacaccagcagtagcacgaagttcgtatatc
gacccaagagtaatcgataaataccttgatgggaaaacactgcggtattttcagaaagaa
ataaacaaaatgcttcaaacaagcgaaaatttatcaaatagcgaattgggcgttttatgc
cttttgcgtgaacgtttaaagtaa
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