Paracoccus sp. AK26: FIU66_00915
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Entry
FIU66_00915 CDS
T08451
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
paak
Paracoccus sp. AK26
Pathway
paak03030
DNA replication
paak03430
Mismatch repair
paak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU66_00915
03430 Mismatch repair
FIU66_00915
03440 Homologous recombination
FIU66_00915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paak03032
]
FIU66_00915
03400 DNA repair and recombination proteins [BR:
paak03400
]
FIU66_00915
Enzymes [BR:
paak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU66_00915
DNA replication proteins [BR:
paak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU66_00915
DNA repair and recombination proteins [BR:
paak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU66_00915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
PAS_4
Motif
Other DBs
NCBI-ProteinID:
QIR83883
LinkDB
All DBs
Position
198917..200818
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AA seq
633 aa
AA seq
DB search
MTRRGSLRLRLLALFAAYGLATLGVAGAALWLAARDGTDAVVQGVMVAGFGLAGLATGLW
YLFDQHLARPIEMLAGSLRTGRPPDLSKTAHLADLGPAAQDAAAARLRTAEALDQALQTH
AAEQVREKATLESILAEFGAGAVMTDGQGRVIFYNASAAGLLPGLALDRPLDRHLSGAAL
QAARARLDAGAPATDLSWMTGQGTRMSARLRRIEQGLLLTMRQPLPDSLAPRATLEALRR
HAATLVPLLEALEGPVPPSLAKVLRAEGRGLAATTRRLSQILADDAPSGLAGLDELTAGL
AHAGLLPPLVFRAEAGPLNALLVFLDRQLRAEGLEPRVSVRPDVLEGMQLVLEWQGAPVP
VDQLEAWLGKAPDPGQPDLAGAEVLAAHGTAIWPEVDGRMARLVLPLARAEAAAEGRGVT
YDFALAGRALSSSRLADLTCVVFDTETTGLTDGDRIVQIAGLRLVRGRLTGERFDTLVDP
GRPVPPASTAIHGITDRMLRGAPDLAAALAAFRHFCEGSVLIAHNAPFDMGFLRRAETET
GIRFDNRVLDTVLLSAMVWGQSADHTLDGLASRLGIQIPPENRHRAMGDAIATAEAFLRL
IPALEAKGIERFEDAVAEARRHRRLIGDANLPH
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggcgcggctctttgcggctgcgcttgctggcgcttttcgcggcctatggcctg
gcaacccttggcgttgcgggtgcggcattgtggctggcggcgcgcgatgggaccgatgcg
gtcgttcagggcgtcatggtggcgggcttcgggcttgcgggcctggcgaccgggctgtgg
tatctgttcgaccagcatctggcccgtcccatagagatgctggccggcagcctgcgcacc
ggccgcccgcccgacttgtcgaagaccgcccatcttgccgatcttggacccgccgcgcag
gacgccgccgccgcccgccttcgcacggccgaggcattggaccaagccctgcaaacccat
gctgccgaacaggtgcgcgaaaaggccacgctcgaatccatcctggccgagttcggggcg
ggcgcggtgatgacggatgggcaggggcgggtgatcttctacaatgccagtgcggcagga
ctgcttccggggctggcgcttgatcgcccgctggaccggcatctgagcggggcggccttg
caggcagcccgggcgcgactggatgcaggcgccccggcgacggatttgtcctggatgact
gggcagggcacaaggatgtccgcccggttgcgcaggatcgaacagggcctgctgctgacg
atgcgccagccgttgccggacagcctcgccccccgcgcgacgctcgaggcgctgcgccgt
catgccgcaacgctggtgccgctgctcgaggcgctggaaggccccgttcccccgtccctg
gcgaaggtgcttcgggccgaaggccgaggtctggccgcaacgacccgccggctgtcccag
atcctggccgatgatgccccatcgggtctggcggggctggacgagctgacggcgggcctt
gcccatgccggtcttcttccgccgcttgtctttcgggccgaggccgggccgctgaacgcg
ctgctggtgtttctggacaggcaactgcgcgcggaagggctggaacccagggtttcggtt
cgccccgacgtgctggaagggatgcagcttgtcctggaatggcagggcgcgccggtccct
gtcgaccaactggaagcatggctgggcaaggcacccgatccggggcagcccgacctggcc
ggggccgaggttctggccgcgcatggcacggcgatctggcccgaagtcgacggccggatg
gcgcgtctggtcctgccgctggcccgggccgaggccgcggccgaagggcgtggcgtgacc
tatgactttgcccttgcgggccgcgccctttcgtcgtcccgcctggcggacctgacctgc
gtggtcttcgacaccgaaactaccggcctgaccgacggcgaccggatcgtgcagatcgcg
ggcctgagactggtgcggggacggctgaccggcgagcgcttcgacacgctggtcgatccg
ggtcggccggtcccgccggcctccaccgccatccacggcatcacggacaggatgctgcgc
ggcgcgcccgacctggccgctgccttggccgcgttccggcatttctgcgaaggcagcgtc
ctgatcgcccacaacgcacccttcgacatgggcttcctgcgccgggcggaaaccgaaacc
ggcatccgcttcgacaaccgggtgctggacaccgtgctgctgtcggcgatggtctggggc
cagtccgccgatcacacgctggacggcctggccagtcgcctggggatccagatcccgccc
gaaaaccgccacagggcgatgggcgatgccatcgcgacggccgaagccttcctgcggctg
atcccggcgctcgaggcaaagggcatcgagcggttcgaggatgccgtggccgaggcccgt
cgccaccgccgcctgatcggcgacgcgaacctgccgcattga
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