Paracoccus sp. AK26: FIU66_02270
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Entry
FIU66_02270 CDS
T08451
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
paak
Paracoccus sp. AK26
Brite
KEGG Orthology (KO) [BR:
paak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paak03019
]
FIU66_02270 (hrpB)
Enzymes [BR:
paak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FIU66_02270 (hrpB)
Messenger RNA biogenesis [BR:
paak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FIU66_02270 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
CON_HrpB
HA2_N
ResIII
AAA_19
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIR84136
UniProt:
A0A6G9W6U5
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All DBs
Position
469319..471775
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AA seq
818 aa
AA seq
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MPDRLPINDVLAPLCDALAAHGRAVLVAPPGAGKTTRVPLALLDRVAGRIVMLEPRRLAA
RAAAERLAEQLGEAVGTRVGYRMRGESVPGSRIEVVTEGILTRMIQSDPSLDGIGCVIFD
EFHERNLNADLGLALVWEAKGALREDLAVLVMSATLEAEPVAALLDDAPVIRSEGRAFPV
ETRWLPRPLPAGARLVDEAARLIAQAEAETRETGGTILAFLPGEGEIRRVMAQLGDGCEV
LPLYGALKPAEQRAALAPPGARRRIVLATAIAETSLTIPAVRVVVDAGRARRARFDPGSG
MSRLVTERVSRAEAEQRRGRAGRVAPGICYRLWARAEEGALPAFAPPEIAVADLAGLALE
LAAWGSEPDDLAFLTPPPEGALAEARALLRGLEALDAGERITDHGRALARLPLHPRLAHM
LTLAGPDAADVAALLSNRDPLRGAPVDLSLRLSALRDPKAFAARHPFEANRAVVQQIRDE
AARLRRLVASRDCRGASPPVPLGYLREEELGGIVSLAYPDRIGLRRKGDEPRFVLSGGKG
AVMEGSDPMAAQRLIVAVDLDGDGREARIRMAARLDESSLRDLHGDRIEAAGICEWSRRE
GRVLARVQERLGALVLSDRAWPEVPEEAVARAALEGLRLDGLTWSAAAARLRARIALLPD
LGPVDDASLLADADWLLPLLGRARTLADLRGLDLVEPLKARIGWDGQQRLDREVPAHFVT
PLGRKVPIDYDHEQPSIELRLQELFGVTRHPVVGGRPLRISLLSPGGKPVQVTTDLPGFW
ASSYADVRKDMRGRYPRHPWPEDPREADPTTRAKPRGT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcggttgcctatcaacgatgttcttgccccgctgtgcgatgcgcttgccgcg
catggccgggcggtgcttgtggccccgcccggcgcgggcaagaccacgcgcgtgccgctg
gcgctgctggaccgggtcgcgggcaggatcgtgatgctggagccccggcggctggccgca
cgggccgcggccgagcggctggcggaacagttgggcgaggccgtgggcacgcgcgtcggt
taccggatgcgcggcgaatcggtgccgggcagccggatcgaggtggtgaccgaggggatc
ctgacgcggatgatccagtccgacccctcgctggacggcatcggctgcgtgatcttcgac
gaattccacgaacgcaacctgaacgcggacctgggcctggccctggtgtgggaggcgaag
ggtgccctgcgcgaggatctggcggtgctggtcatgtccgccacgctggaggccgagccg
gtggccgcccttctggacgacgccccggtgatccggtccgaaggccgtgcctttccggtc
gagacccgctggctgccccgcccgctgcctgccggcgcgcggctggtcgacgaagccgcg
cggttgattgcgcaagccgaagccgaaacgcgcgagaccggaggcacgatcctggccttc
ctgcccggcgagggagagatccgccgcgtcatggcgcagcttggcgatgggtgcgaggtg
ttgccgctttacggtgcgctgaagcctgcggaacagcgcgcggcccttgccccgccgggc
gcgcggcggcggatcgtgctggcgacggcgatcgccgaaacctcgctgaccatcccggcg
gtgcgggtggtggtcgatgcgggccgggcgcggcgggcgcgcttcgatccgggctcgggg
atgtcgcggctggtgacggaacgcgtcagccgggccgaggccgagcagcgccggggccgc
gcgggccgcgtggcgccaggcatctgctatcgcctgtgggcgcgggccgaggaaggcgcg
ctgcccgcctttgccccgcccgagatcgccgtggccgacctggcgggccttgccctggaa
ctggccgcctggggatccgagccggacgacctggccttcctgacgccaccgcccgaaggt
gccctggccgaggcgcgggcattgctgcgggggcttgaggccttggatgctggagagagg
atcaccgatcatgggcgggcgctggcgcggttgccgctgcatccccggctggcacatatg
ctgacgctggcgggcccggatgcggccgatgtcgcggcgctgttgtcgaaccgcgatccg
ctgcggggggcgccggtcgatctgtccctgcggctgtcggcgctgcgcgatcccaaggct
tttgctgcccgtcatccgttcgaggcgaaccgggcagtcgtccagcagatccgcgacgag
gctgcgcggctgaggcggctggttgcgtcccgcgactgccggggggccagccccccggtc
cccctaggatatttgcgtgaagaagaactgggcggcatcgtctcgctggcctatcccgat
aggatcggtctgcgccgcaagggggacgagccgcgcttcgtgctgtcgggcggcaagggt
gcggtgatggaggggagcgacccgatggccgcgcagcggctgatcgtggccgttgatctg
gacggtgacggacgcgaagcccgcatccgcatggcggcacggctggatgagtccagcctg
cgcgacttgcatggcgacaggatcgaagcggccgggatctgcgaatggtcgcggcgcgag
gggcgcgtgctggctcgggtgcaggaacgactgggagccttggtcctgtcggatcgggcc
tggcccgaagtcccggaagaagctgtcgcccgggccgccctggaagggctgcggctggac
gggctgacctggagcgcggctgcggcacggttgcgggcgcggatcgcgctgttgccggat
ctggggccggtggacgatgcaagccttctggccgacgcggactggctgctgcccttgctg
ggccgggcgcggacactggccgatctgcgcgggctggatctggtcgagcccctgaaggcg
cgcatcggctgggacggccagcagcggctggaccgcgaggttccggcgcatttcgtcacg
cccctgggccgcaaggtgccgatcgactatgaccacgaacagccctcgatcgagctgcgc
ctgcaggaattgttcggcgtgacgcgccacccggtcgtgggcgggcggcccttgcggatc
agcctgctgtcgccgggcggcaagcccgtgcaggtgacgacggacctgccgggcttctgg
gcgtcatcctatgccgatgtcagaaaggacatgcgcggccgctatccccgacacccctgg
cccgaggacccgcgagaggccgatcccaccacgcgggccaagccgcgcggaacctag
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