Paracoccus sp. AK26: FIU66_02985
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Entry
FIU66_02985 CDS
T08451
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paak
Paracoccus sp. AK26
Pathway
paak03030
DNA replication
paak03430
Mismatch repair
paak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU66_02985 (dnaE)
03430 Mismatch repair
FIU66_02985 (dnaE)
03440 Homologous recombination
FIU66_02985 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paak03032
]
FIU66_02985 (dnaE)
03400 DNA repair and recombination proteins [BR:
paak03400
]
FIU66_02985 (dnaE)
Enzymes [BR:
paak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU66_02985 (dnaE)
DNA replication proteins [BR:
paak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU66_02985 (dnaE)
DNA repair and recombination proteins [BR:
paak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU66_02985 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QIR84260
LinkDB
All DBs
Position
618591..622061
Genome browser
AA seq
1156 aa
AA seq
DB search
MPSENPRFIHLRTHSEHSLLEGAIPVGKLPGLAADAGMPAVALTDTNAMFAALEFSVKAM
DKGVQPIIGCQITLQDGATGPVVLLAQNQAGWLNLMALSTCLYLRDGGALPHITVDELCA
RSEGLICLTGGATGPLGCLIAQGQREKADALADRLAAAFPTRLYVELQRHPGENGQLMPA
ETASEAGLIDLAYAKNLPLVATNDVYFPKASMFEAHDALICIAEKAYVDQSQPRRRLTPQ
HYFKTAEEMAVLFADLPEALENTVEIARRCAFAVKKHAPILPRFADDEVSELRRQAREGL
ERRLAVIPHAFSVEEYHQRLEFELGIIEQMGFPGYFLIVADFIGWAKERDIPVGPGRGSG
AGSLVAYALTITDLDPLRYNLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQNKYGAE
KVGQIITFGALLSKAAVRDVGRVLQMPFGQVDRLSKMIPVEGVKPVSIAKARADEPRLRE
AAKEEVVKRLLDYAEQLEGLYRNASTHAAGVVIGDRPLDQLVPLYRDPASDMPATQFNMK
WVEQAGLVKFDFLGLKTLTVIQNAVDLINGGGRPLHVAADGRKLYDPAPGTENQINLIPL
DDKATYDLFASAKTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTYCE
VKNGLRELESLHPSIDPILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIAS
EMAKERPKFVDGAVANGVDAKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANH
PVEFMAAVMNCDIHLTDKLAIYKRECDRMGITIVPPCVNRSAPTFSVREGRIHYALGALK
GVGVEAMKLIHDARGDTPFRDIHDFARRVDMKRVGKRPLEMLARAGAFDVLDDNRARVVK
GLDALCAWSAAVQEQAASSQTSLFGGGEDLPPPRAPITGVWLPTEKLAEEHKAVGFYLSG
HPLDDYLPALKRKKVQTLAEISQEALGGPLVASIAGTVAARMERKSAKGTPYAFVSLSDP
TGLYEVTVFSDLLTASRDRLEPGQNVVLQVKVEPSGDGVKMLANSVAAMDEVVADAGAGC
LAVEMQGSDTIARLAETLARIRTEITVPARSRGPVLLRIREGDEVIEIEVANDAPLTTPA
RQALRAVPGVLDVVEE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagaaaatccccgattcatccatctgcgcacacattccgagcattcgttgctt
gaaggtgccatcccggtcggcaagctgccggggctggccgccgatgccgggatgcccgcc
gtcgcgctgacagataccaatgcgatgttcgcggcgctggaattcagcgtgaaggcgatg
gacaagggcgtgcagccgatcatcggttgccagatcaccctgcaggacggggcgacgggg
ccggtcgtgctgctggcgcagaaccaggcgggctggctgaacctgatggcgctgtcgaca
tgcctttacctgcgcgacggcggcgcgctgccccatatcaccgtggatgaattatgcgcg
cggtcggaaggcctgatctgcctgaccggtggcgcgaccgggccgctgggctgcctgatc
gcgcaagggcagcgcgaaaaggccgatgccctggccgaccggctggccgccgcctttccg
acccggctttacgtcgaattgcagcgccatccgggcgagaatgggcagctgatgcccgcc
gagaccgcgtccgaggcggggctgatcgacctggcctatgccaagaacctgccgctggtc
gcgacgaacgatgtctatttccccaaggcgtcgatgttcgaggcccatgacgcactgatc
tgcatcgcggaaaaggcctatgtggaccagtcgcagccccgccgccgcctgacgccgcag
cattacttcaagacggccgaggaaatggccgtgctgttcgccgacctgcccgaggccctg
gaaaacaccgtcgagatcgcgcgccgctgcgccttcgccgtcaaaaagcacgccccgatc
ctgccgcgcttcgccgacgacgaggtcagcgagttgcgccgccaagcccgcgaggggctg
gagcgtcggctggccgtcatcccccatgccttcagcgtcgaggaataccaccagcggctg
gagttcgagctgggcatcatcgagcagatgggctttcccggctatttcctgatcgtggcg
gatttcatcggctgggccaaggaacgcgacattcccgtggggccgggccgggggtcgggc
gcggggtcgttggtcgcctatgcgctgaccatcaccgacctggatccgctgcgctacaac
ctgctgttcgaacgtttcctgaacccggagcgcgtctcgatgccggatttcgacatcgac
ttctgcatggaccggcgcgaggaagtgatccgctatgtccagaacaaatacggggccgag
aaggtgggccagatcatcaccttcggcgcgcttctgtccaaggccgccgtgcgcgacgtg
ggccgcgtgttgcagatgcccttcggccaggtggaccgcctgtccaagatgatcccggtc
gagggcgtgaagcccgtcagcatcgccaaggcccgcgccgacgagccccgcctgcgcgag
gccgccaaggaggaggtcgtcaagcgcctgctggactatgccgagcagcttgaagggctt
taccgcaacgcgtccacccatgcggcgggcgtggtgatcggcgaccggccgctggaccag
cttgtgccgctgtatcgcgatccggcgtccgacatgccggccacgcagttcaacatgaaa
tgggtggaacaggccgggctggtgaagttcgacttcctgggcctcaagacgctgacggtg
atccagaatgccgtggatctgatcaacggcggcgggcgcccgctgcatgtcgcggccgac
ggccgcaagctttacgatccggcgccggggacagaaaaccagatcaacctgatcccgctg
gacgacaaggcgacctatgacctgttcgccagcgccaagacggtggcggtgttccaggtc
gaaagttcgggcatgatggacgcgctgcggcgcatgaagcccacctgcatcgaggatatc
gtggcgcttgtcgcgctctatcgtcccggcccgatggagaacatcccgacctattgcgag
gtcaagaacgggctgcgcgaactggaatcgctgcacccctccatcgacccgatcctggcg
gaaacccagggcatcatcgtttatcaggaacaggtgatgcagatcgcgcaggtcatggcg
ggctacagcctgggcggcgcggacctgttgcgccgggcgatgggcaagaagatcgcctcc
gagatggccaaggaacgcccgaaattcgtcgatggggcggtggcgaacggcgtggacgcc
aagaaggcgggcgaggtcttcgacctgctggagaaattcgccaattacggcttcaacaag
tcgcacgcggcggcctatgccgtggtcagctatcagaccgcctggctgaaggcgaaccac
ccggtcgagttcatggccgcggtgatgaactgcgacatccacctcaccgacaagctggcg
atctacaagcgcgaatgcgaccgcatgggcatcacgatcgtgccgccctgcgtgaaccgg
tcggcccccaccttcagcgtccgcgagggccgcatccattacgccctgggcgcgctgaag
ggcgtcggcgtggaggcgatgaagctgatccatgacgcgcggggcgacacgcccttccgc
gacatccacgatttcgcccgccgcgtggacatgaagcgcgtgggcaagcgcccgctggag
atgctggcccgcgccggggccttcgacgtgctggacgacaaccgtgcccgcgtggtcaag
ggactggacgcgctttgcgcctggtcggctgcggtgcaggaacaggcggcctcaagccag
acatcccttttcggcgggggagaggatctgccgccgccgcgtgcgcccatcaccggggtc
tggctgcccacggaaaagctggccgaggaacacaaggccgtgggcttctatctgtcgggc
catccgctggacgattatctgcccgcgctcaagcgcaagaaggtccagaccctggccgag
atcagccaggaggccttgggcggcccgctggtcgccagcatcgcgggcacggtcgccgcg
cggatggaacgcaagtccgccaagggcacgccatacgcctttgtcagcctgtccgacccg
accgggctatacgaggtgacggtgttttccgacctgctgactgcgtcccgcgaccgtctg
gaaccggggcagaacgtggtgctgcaggtcaaggtcgaaccctcgggcgacggggtcaag
atgctggcgaactcggttgcggccatggacgaggtggtggcggacgccggggcgggctgc
cttgccgtggaaatgcagggcagcgacaccatcgcccgcctggccgagacattggcccgc
atccgcaccgaaatcaccgtgcccgcccggtcgcgtggccccgtgttgctgcgcatccgc
gaaggcgacgaggtgatcgaaatcgaggtggcgaatgacgcccccctgaccacccccgcc
cgacaggccctgcgcgccgtccccggtgttctggacgtggtcgaggaatag
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