Paracoccus sp. AK26: FIU66_12425
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Entry
FIU66_12425 CDS
T08451
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paak
Paracoccus sp. AK26
Pathway
paak03410
Base excision repair
paak03430
Mismatch repair
paak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU66_12425 (recJ)
03430 Mismatch repair
FIU66_12425 (recJ)
03440 Homologous recombination
FIU66_12425 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paak03400
]
FIU66_12425 (recJ)
DNA repair and recombination proteins [BR:
paak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FIU66_12425 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FIU66_12425 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FIU66_12425 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QIR85943
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Position
2503848..2505584
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AA seq
578 aa
AA seq
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MTFLGIEQSLTNRRWVGPDGAADRAAEGLAQRTGLPLAVARVLAERGVEADGAEGFLTPR
LRDLLPDPLSLRDMEVAADRLVAAATGGERIAVFADYDVDGGASAALLLDWLRAQGRDAT
LYIPDRIDEGYGPNAPAMAALARDHDLIVCVDCGTLSHDALAAASGTDIIVLDHHLGGET
LPPALAVVNPNRADEVGTLGHLCAAGVVFLTLVQAGRVLRAKGLPEPDLMAMLDLVALAT
VADVAPLVGVNRAFVRQGLAIMSRRRRPGLVALSDVARLDGPPGAFHLGFLLGPRINAGG
RVGRADLGALCLSCRDPREAGRLAAELDGLNRDRRAIEAAVRDEALAQVEARGDARLSWA
AGPGWHPGVVGIVAARVKEATDLPSVVIGVEGGIGKGSARSVPGVDLGRAIHRLAEEGLL
LKGGGHMMAAGLTVAEEMIPAAMARLADLIQKDLVQRTGARDLRISGLMECVGATPQIYR
QLEDAGPYGQAAPAPRFAFADQLIDSASTMGDSHLRLSFRSAGGPALEAVAWGAMTGPLG
PALIGARGRRFHLAGKLDLSTWGGRERLRLRLEDAAPV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttcctgggaatcgagcaatcgctgacgaatcggcggtgggtcggcccggacggc
gcggcagaccgcgcggccgaaggccttgcccaacgcaccgggctgcccctggccgtcgcg
cgcgtcctggccgaacggggagtcgaggcggatggcgccgagggcttcctgacgccccgg
cttcgcgacctgctgcccgatcccttgtcgctgcgggacatggaggtggccgccgaccgg
ctggtcgcggcggcaaccggcggcgaacgaattgcggtctttgccgattacgacgtggat
ggcggtgcttccgccgcgctgctgctggactggctgcgggcccagggccgggacgccacg
ctgtatattcccgaccgcatcgacgaaggctatggcccgaacgccccggcgatggctgcg
cttgcacgcgaccacgacctgatcgtctgcgtcgattgcggcacgctgagccatgacgcc
ctggccgccgcctcaggcaccgacatcatcgttctggaccatcacctcggcggggaaacc
ctgccccccgcgcttgcggtggtgaaccccaaccgtgcggacgaggtcgggacgctgggc
catctttgcgcggctggcgtggtcttcctgaccctggtccaggcgggccgggttctgcgc
gccaagggcttgcccgagcctgacctgatggcgatgctggatctggtggcgcttgcaacg
gtggcagatgtcgcgcccctggtcggcgtcaaccgcgcctttgtgcggcaggggctggcg
atcatgtcgcgccgccgtcgtcccggccttgtggcgctgtccgatgtggcgcgcctcgac
ggtccgccgggcgcgttccacctgggcttcctgctgggtccgcggatcaatgccggcggt
cgtgttggtcgcgccgatctgggcgcgctgtgcctgtcctgccgcgacccgcgagaggcg
gggcgtctggcggccgaactggacgggcttaaccgcgaccggcgcgccatcgaggcggcc
gtccgtgacgaggcactggcacaagtcgaggcgcggggcgatgcccgcctgtcctgggcc
gctggtcccggctggcatcctggcgtcgtgggcatcgttgccgcccgggtgaaggaggcc
accgacctgccctcggtcgtgatcggggtggaaggcggcatcggcaagggcagcgcccgg
tcagtcccgggcgtggacttgggccgcgcgatccaccggctggccgaggaaggcctgctg
ctcaagggcggcgggcatatgatggccgcgggcctgaccgtggccgaggagatgatcccc
gccgccatggcccgccttgccgacctgatccagaaggatcttgtgcagcggaccggggcg
cgcgacctgcgcatctcgggcctgatggaatgcgtgggcgcgaccccgcagatctatcgc
cagttggaagacgcaggcccctacggccaggcggcccctgcgccgcgctttgcctttgcc
gaccagttgatcgacagcgccagcaccatgggcgacagccacctgcgcctgtccttccgc
agcgcgggcggcccggccctggaagccgtggcctggggcgcgatgaccggcccgctgggg
ccggcgctgatcggcgcgcggggccggcggtttcatctggcgggcaagctggatctgtcc
acctggggcgggcgcgaaaggctgcgcctgcgcctggaagacgcggcgcccgtctga
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